Gene Plim_1674 details

Gene Information

• Locus tag: Plim_1674
• ID: 9138375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2170976
• End bp: 2171740
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 56%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003629704
• Protein GI: 296121926

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATT TAACCAATAA GATCGCCCTC GTCTCCGGGG CCTCACGCGG CATTGGTCGC 
GCGACAGCAT TGCAACTTGC CCGCGCCGGG GCTGACGTGG TCATCAATTA TGTACAATCT 
CGCGACAGTG CTGACCGAGT GGCAGAAGAG ATCGCCGCCA TGGGCCGCCG CGTGGCCATT 
GTCCGTGCGG ATGTCAGCGA GCAGAGCGAT GTTCAGAGCA TGATGGAATT TGTGGGCAAT 
GAATTTGGCA GGCTCGACAT TCTCGTCAGT AATGCTGCAT CGGGGGGATT CCGCCCCTTG 
CTGGCGGCCA CTCCCAAGAA TTTCGAAGCC GCGATGAATA CCAATGTCCG CGCACTTCTA 
TTCCTCGTAC AGGCCGCACA TCCTTTGTTG GGGCAAAGTG TCGATCGAGC CAAGATTGTG 
GCCATTTCGA GCCATGGCTC ACACATGGCA CTCCCATGGT ATGGCCTGAT TGGTACCTCC 
AAAGCAGCAC TGGAAAGCCT GATTCGCCAC ATGGCACTTG AGTTTGGCGA CCAGGGAATG 
AACTTCAACG TCGTCCAGGC GGGACTGGTT CCCACAGACT CCACCAAGAT GATTCCTGGC 
TCCGAAGTCA TGTTCAATGC GCGAAGCTCC AAGACCATGA TGGGTGATCG CCAACTGGAA 
CCCGAAGACG TTGCGAACGC AGTCCTTTAC CTTTGCAGTC CACTGAGCGA TCTGGTGCAA 
GGGCAAGTCT TGATCATCGA CGGCGGGGCC GCCATTCACG TCTAA 

 

Protein sequence

MIDLTNKIAL VSGASRGIGR ATALQLARAG ADVVINYVQS RDSADRVAEE IAAMGRRVAI 
VRADVSEQSD VQSMMEFVGN EFGRLDILVS NAASGGFRPL LAATPKNFEA AMNTNVRALL 
FLVQAAHPLL GQSVDRAKIV AISSHGSHMA LPWYGLIGTS KAALESLIRH MALEFGDQGM 
NFNVVQAGLV PTDSTKMIPG SEVMFNARSS KTMMGDRQLE PEDVANAVLY LCSPLSDLVQ 
GQVLIIDGGA AIHV