| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1657 |
|---|
| Symbol | |
|---|
| ID | 9138358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2143043 |
|---|
| End bp | 2144056 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003629688 |
|---|
| Protein GI | 296121910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCCC GGTGGTGGTT GAGAAGCGGG CACCTGCAAA CAATCGCTTG CGGATTGTGG
CCCGTTTCCG AGGAGCCGGG AGATTCTTTG CGTGAAGTGG TTCAGCTGGA CGATGGCGAT
CGACTGACTG TTTATGCGAA TTTTCCCGCA GAAAATTCTC CTGTTAATCC TTCCGAGATC
CCTTTGACTG TCCTCCTGAT GCCCGGCCTG TGTGGAGACC ATCGAAGTGG GCTGATCCGT
CGATTGACCA GCCAGTTGCT TCAGGCAGGC ATTTCTGTGG TACGGATGAA TCATCGCGGC
TGCGGTGAAC AGGAGATTCT GGCCCAAAGG CCCTACCATG CAGGTCGCAC GTCTGATCTG
CTGGCTGTTA TCGACTGGTG GAAGCAATCC CCGTGGGCGA TTGAGGCTTC GGGAAAACGT
CGCCAGCTGG CCCTTTGTGG AATCTCGTTG AGCGGAAATA TTTTGCTGAA AACATTGGGT
GTAGCCGCTC GCGAGTTACC GGCAGAAGTC GTGGCGGCTC TGGCCATCAA TCCACCGATT
GATCTCTCTC AGTGCGTCAA GCAGCTTTCC GTGGGTTTGA ACCGGATCTA CGACCAGTTC
TTTGTCAGGC GTCTCTATGG AGAACTTGCC AGGCGTAAAG ATGCCACCCG CTGGCCAAAA
GAACTTCGAC GCCCCAAAAC TCTCCTGGAG TTTGACGAGT TCTATACGGC TCCCCGCAGT
GGATTTGTAA GTGCCGAGGA GTATTACAGA CTTTCCAGTG CCCGATCGAC ACTCGATCAG
ATTGAAATAG CCACCACCGT CCTGACGTCG CAGGATGATC CCTTAATTCC TGTGTCGATT
TTCAGTGACG CACAGGCTCG CTGGTCGCCT TCCACCCGGG TCGTTGTCGC CCGATCGGGA
GGTCATGTCG GTTACTTCGA AACTCGTCAG GGTGGGAAAA GTGGCTTCTG GCTCGATGAG
TTTGTGGCAC ATTGGGCACT CGGGGTGGCT GGCGGGCCGG TAAATCGACT TTAA
|
|---|
| Protein sequence | MSPRWWLRSG HLQTIACGLW PVSEEPGDSL REVVQLDDGD RLTVYANFPA ENSPVNPSEI
PLTVLLMPGL CGDHRSGLIR RLTSQLLQAG ISVVRMNHRG CGEQEILAQR PYHAGRTSDL
LAVIDWWKQS PWAIEASGKR RQLALCGISL SGNILLKTLG VAARELPAEV VAALAINPPI
DLSQCVKQLS VGLNRIYDQF FVRRLYGELA RRKDATRWPK ELRRPKTLLE FDEFYTAPRS
GFVSAEEYYR LSSARSTLDQ IEIATTVLTS QDDPLIPVSI FSDAQARWSP STRVVVARSG
GHVGYFETRQ GGKSGFWLDE FVAHWALGVA GGPVNRL
|
|---|
| |