| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1651 |
|---|
| Symbol | |
|---|
| ID | 9138352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2133532 |
|---|
| End bp | 2136219 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | PAS sensor protein |
|---|
| Protein accession | YP_003629682 |
|---|
| Protein GI | 296121904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATCG CAGAGCATAG GTCATCCCTC GATTTTCTTG CTGACTACAA GAGCTTCCTG
GAAACAGTCC CGGCCGGTGC TGAACTGCTT GATGCCGATG GCCGTGTGAT TTACGCCAAC
GCCGAGTATT TTCGAATATT TGGCTGTCCA CCTCGTCGCT CGGAAGGTTC ACCCTGGCTG
CAGCGCTTCC AAAACCACAA TTTGATGGAG GCCACACGCC AATGGGAAGG TGTTCAACAC
GATGAAGAGA TTGAAGGCGA GCAAACCGAA CAAACTTATG ACGGCTCGCG AGTCTTCATT
CGTTATCGTT TTTGCCAACT GCACAGGGTG AATGGCGATT CCACACTCAG GCTTTTTGTA
CGGTATTCTC AGCAAGTCCC CGCGGTCAGT TCCTGCGAAC CCCCGGCATG CTCCACTGGA
TCGCCTTGTA TTCCTTTGAT CGAACAACTG CCCATTATTG CCTGGGCAGC CGATGCCAGG
AACAACTGCA CCTACGTCAA TACCTTCTGG CATCAATTTA CTGGTGCTGC TCATCATGAG
CATCTCGGGC AAGGTTGGCT GAATTTCATC CACCCAGAGG ATCTGGAGAG AATTCGTTCA
GCAGATGAAA ATCAGGCCAC TTCCGATCTG CAATACCGCA TTCGCAGGAA GGATGGCGAG
TATCGCTGGT TTCTCGAATT CAGCAAGCCC TGCGTGAACC AGGATGGCCA GATTGATGGC
TACACAGGGA TCTGTATCGA TACCACTGAG AGTCTTCGTG AATCGCGTGT TTCTGTCGAG
CGAAAAAAGC AATTGCGTGC CATGGTCGAG CACGCTCCGG GAGTCGCTAT TCAATGGTTT
GATCGAGAAG GGCGGATTCA ACTCTGGAAT GCCGCTTCGA CCCAGATGTT TGGTTTTACT
GCCGAAGAAG CCATCGGAAA AACTTACGAC GAACTCATTC ACACTCCCGC AGAGTTTGCC
TGCTTGCTCA AGACTCTGGA TGAGATAGTA CAAACGGGCC AGTCGATTGG TCCGAATGAG
TATCAATTTC ATCGAAAAGA CGGCTCCACT GGAACTTGCC TCTCGACACT CTTTTGTATT
CCCTCCCATG ACGAACAGCC TTTGTTCTGC TGCATGGATA TCGACATTAC CGAGCGCATC
CAGACGGAAA ATGCACTCCG GGAAAGTGAA GCCAAGTTCC GCACCCTAGC CAAAAATTTC
CCGGATGCGA TCTTCATTCT CGACCCCGAT GAATCTCAAT TGCCACTCAA GATTGCCTTC
GCGAATGACG CAGTCCGCAC GATTCATGGC TACCAACCCG AAGAACTCAT TGGCCAATCG
CTGGCTAAAA AAATTGACGA CGCACCCACA GCCGATCAGG TCCCCGAGAG AATTTCCCGC
CTTAGAAAAG GCGAAGTGCT TCGATTCGAT GCGACACATA TCCATCGGGA TGGTCACACC
ATCCCCATGA GTGTGACCGC CTGCATGATT TCCTGGGATG GCAAAACGAT GCTGCTGGGA
ATCAACCGGG ATATGTCTTT GCAAAAGGCT GCCGAAGAAG CGCAGCGCGA AAGTGAAGCT
CGTTTCCGAT CGGCGTTTTA TTCTTCTGCC ACAGGGATGG CGATTGTCTC CCTTAAAGGA
GAATTCCTGG ATGCGAATAC TGCTCTTTGC AGCATGCTGG GGTACTCACT TGAAGAATTG
ACCTCGACAA GTTTCCCGGC CATTACGCAC CCGACAGAAG TTGATCGCGA TATCCATGCG
ATGAAACGTC TGATTCGTGG AGAAATTCCT TTTTACACGA CGGAAAAGCG ATATCGCCGC
CAAGACGGCA GCTACGTCCC GATTTATATC TCAGCAGCTC TGGTCCGTAA CAGCCACGGA
GATCCCGCCT ATTTTGTCTC ACAAATGCTC GACCTCTCTG AGAAAAAACG GCTTGAGCAG
GAATTGATCC AGAACCAGCG TCTCTCGGTG ATGAAGCAAA TGGCCAGCGG GCTCTCTCAC
GATTTCAATA ACCTCATTTC TGTCATCCTC GGTTATTGCG AGACACTTCT GATCAGACCA
GACACCACCG ATCAGCAGCG AAGTCTGATT TTACCGATCC GTGAAGCAGG GCATCATGCT
TCGCGGATGA TCAGGCAACT CATCGCGTTC AGCCGCAAAC AGCCCGTGGC CTTCGAACGG
ATCAATTTGA ATTCCATCAT TCGCAGTATG GAAATGATGG TTCGTGGCAT CCTGCGACAG
AACTTTGTGC TGGATCTTCG TTTGGCCGAA CTCCTCCCCA ACATCATGGC AGATCCCGTG
CAGATCGATC AGATTCTGGT GAATCTGGCC ATCAATGCCC GCGATGCCAT GCCGGAAGGA
GGAACATTCG CAATCAAAAC CGAGTGGGTC TCGTCACATG CCGACCACCC ACAATCGATA
CGCACCACGG AAACAGTCGT GCAGGCGAAT GATCTTGTCC GCATCACTGT CAGCGATACG
GGAACCGGTA TCCCGAAAGA TCTCATCCCG CGCATTTTCG AACCGTTCTT TACGACAAAA
GGCGAGGGAC AAGGCCATGG ACTGGGTCTC TCCGTCGTTC ACGGAATCGT CAATCAGGCC
GGTGGCACCA TTCGCGTCTT CAGCGAGCCA GGAAAGGGGA CCACGTTCGA AATCGACCTT
CCCGCCTGTG TCGGGCCCAT CTCCCCGGAT CGTCCCGAAG CTCCCTGA
|
|---|
| Protein sequence | MHIAEHRSSL DFLADYKSFL ETVPAGAELL DADGRVIYAN AEYFRIFGCP PRRSEGSPWL
QRFQNHNLME ATRQWEGVQH DEEIEGEQTE QTYDGSRVFI RYRFCQLHRV NGDSTLRLFV
RYSQQVPAVS SCEPPACSTG SPCIPLIEQL PIIAWAADAR NNCTYVNTFW HQFTGAAHHE
HLGQGWLNFI HPEDLERIRS ADENQATSDL QYRIRRKDGE YRWFLEFSKP CVNQDGQIDG
YTGICIDTTE SLRESRVSVE RKKQLRAMVE HAPGVAIQWF DREGRIQLWN AASTQMFGFT
AEEAIGKTYD ELIHTPAEFA CLLKTLDEIV QTGQSIGPNE YQFHRKDGST GTCLSTLFCI
PSHDEQPLFC CMDIDITERI QTENALRESE AKFRTLAKNF PDAIFILDPD ESQLPLKIAF
ANDAVRTIHG YQPEELIGQS LAKKIDDAPT ADQVPERISR LRKGEVLRFD ATHIHRDGHT
IPMSVTACMI SWDGKTMLLG INRDMSLQKA AEEAQRESEA RFRSAFYSSA TGMAIVSLKG
EFLDANTALC SMLGYSLEEL TSTSFPAITH PTEVDRDIHA MKRLIRGEIP FYTTEKRYRR
QDGSYVPIYI SAALVRNSHG DPAYFVSQML DLSEKKRLEQ ELIQNQRLSV MKQMASGLSH
DFNNLISVIL GYCETLLIRP DTTDQQRSLI LPIREAGHHA SRMIRQLIAF SRKQPVAFER
INLNSIIRSM EMMVRGILRQ NFVLDLRLAE LLPNIMADPV QIDQILVNLA INARDAMPEG
GTFAIKTEWV SSHADHPQSI RTTETVVQAN DLVRITVSDT GTGIPKDLIP RIFEPFFTTK
GEGQGHGLGL SVVHGIVNQA GGTIRVFSEP GKGTTFEIDL PACVGPISPD RPEAP
|
|---|
| |