Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1650 |
Symbol | |
ID | 9138351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2131249 |
End bp | 2133174 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003629681 |
Protein GI | 296121903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTT TGGGATTGAA AGAGCTGAGT TTCAGTTATG GTGGAAAGCC ACTGATTGAG AACGCGACAG TTCAGGTGGA GCTGGGCGAA CGAGTCTGTC TGGTGGGTCG AAATGGTACC GGTAAATCGA CCCTGATGAA GTTGATGCTC AGTGAGTTGA AGCCCGATAC GGGCCTCGTT GAGGTTCAAT CAGGTATCAA ACTCGCCCGG CAGATTCAGG ATGTTCCGCG AGGCGTGGTG GGGACAGTCT TTGATGAAGT GGCCCGTGGC TTAGGCTCTC ATGGGGAAGC TGTCGCGGCT CAGTACTGGT TGCACCAATT GAGCCAGAAT CAATTGAGCC AGAATACTGG GGCAAATCCG CGAACAGCCG ATGAAATCAG GCGCATGGAA GAGTTATCTG CCACGCTCGA TCCTGCCTAT GCCTGGGAAT GGGAGCATCA GGTCGAGCAG ATTATCGAAC GAATGGAACT ACCGCATGAT CGGCTCTTTG ACAGCCTTTC TTCGGGGATG AAACGCCGGG TACTGCTGGC TAAATCGCTG GTGATCGAAC CCGATGTGCT CCTGCTCGAT GAACCCACCA ACCACCTGGA TATTGAAGCG ATTCGCTGGC TCGAAGAATT TCTGCTCCGA TTCTCAGGAA CGTTGATCTT CGTGACACAC GACCGCATGT TTCTGCAGCG ACTGGCTACG AGGATCATCG AGATTGACCG CGCCCGTCTG TTCGACTGGA CATGTGATTA TCAGACATTT CTGCAGCGAA AAGAAGCCGC CCTGGCTGCC GAGGAACATG AACAAGCTCT TTTCGACAAG AAATTGGCTC AAGAAGAGGT CTGGATTCGT AAAGGTGTCA AAGCTCGTAA CGTCAGGAAT CAAGGGCGCG TCAAGGCACT GATGGAGATG CGCAAAGAGC GGGCGGCCCG CCGGGCCAAA GTGGGCAATG TCAAAGTTGA GCTTCACCAG GAGGCTGAGC GATCCGGCAC TGTGGTGGCC TTAGCTGAAA AGGTGAATTA CGAAGTTGGC GGGCGAACCA TACTGAGAGA TGTGTCAACA CTCATCACCC GTGGCGACAA GATTGGGATT CTCGGGCCCA ATGGTTGTGG CAAGACGACA CTTTTGCGAA TTCTATTGGG TGAACTCACA CCTCAATCAG GCAAAATCAA ACTGGGTACC CGGTTGGAGA TTGCTTATTT CGACCAGTTG AGGGCACAGC TCAATGATGA TCTTTCTGTG CAGGAGAATG TGTCGCCCGG GGCGGACATG ATTGAGATCA ATGGCCGCCG GAGACATGTC ATTGGGTACC TGGAGGATTT TCTCTTCTCC CCGGAAAGAT CCAGGACGCT GGTGAAGTAT CTCTCGGGAG GTGAGCGCAA TCGTTTATTG TTAGCCCGAT TGTTCTCGAA GCCATCGAAC CTGCTGGTTC TCGACGAACC GACCAACGAT CTCGATGCCG AAACTCTCGA ATTGCTGGAA GACTTGCTGG TCGAGTATCC CGGAACAGTG CTGCTTGTCA GTCATGACCG GCAGTTCATC AACAATGTGG TCACGCAGAC TCTCGTCTTT GAGGGCGAGG GTTCCGTCAA TGAGTATGTC GGCGGGTATG ATGACTGGCT GGCCCAGAAG TCTGTTCGGC AGAACACACC TGTTGTGGCT CAGGCAGCAC CTGTCGCCAA TCAACCGGCA GCCAAAAAGG GAAAATCTCT GAGCTTTAAG GAAGACAAAG AACTGATTGA GCTTCCTGCC AGGATTGAAT CGCTCGAGTT GGAGCAGGCA AATCTCGAAA CCCGCATGGG GCAACCTGAG TTCTTCAAGC AGTCTCCTCA GGATGTGGCG ACTGTCACGG AGAGGTTAAA TCGACTGCAT CAAGAACTAC AGACCGCTTA CGCCCGCTGG GAAGAACTTG AGGCCAAACG CGGCGGGTCA ATTTAG
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Protein sequence | MAVLGLKELS FSYGGKPLIE NATVQVELGE RVCLVGRNGT GKSTLMKLML SELKPDTGLV EVQSGIKLAR QIQDVPRGVV GTVFDEVARG LGSHGEAVAA QYWLHQLSQN QLSQNTGANP RTADEIRRME ELSATLDPAY AWEWEHQVEQ IIERMELPHD RLFDSLSSGM KRRVLLAKSL VIEPDVLLLD EPTNHLDIEA IRWLEEFLLR FSGTLIFVTH DRMFLQRLAT RIIEIDRARL FDWTCDYQTF LQRKEAALAA EEHEQALFDK KLAQEEVWIR KGVKARNVRN QGRVKALMEM RKERAARRAK VGNVKVELHQ EAERSGTVVA LAEKVNYEVG GRTILRDVST LITRGDKIGI LGPNGCGKTT LLRILLGELT PQSGKIKLGT RLEIAYFDQL RAQLNDDLSV QENVSPGADM IEINGRRRHV IGYLEDFLFS PERSRTLVKY LSGGERNRLL LARLFSKPSN LLVLDEPTND LDAETLELLE DLLVEYPGTV LLVSHDRQFI NNVVTQTLVF EGEGSVNEYV GGYDDWLAQK SVRQNTPVVA QAAPVANQPA AKKGKSLSFK EDKELIELPA RIESLELEQA NLETRMGQPE FFKQSPQDVA TVTERLNRLH QELQTAYARW EELEAKRGGS I
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