Gene Plim_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1650 
Symbol 
ID9138351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2131249 
End bp2133174 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content53% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003629681 
Protein GI296121903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTT TGGGATTGAA AGAGCTGAGT TTCAGTTATG GTGGAAAGCC ACTGATTGAG 
AACGCGACAG TTCAGGTGGA GCTGGGCGAA CGAGTCTGTC TGGTGGGTCG AAATGGTACC
GGTAAATCGA CCCTGATGAA GTTGATGCTC AGTGAGTTGA AGCCCGATAC GGGCCTCGTT
GAGGTTCAAT CAGGTATCAA ACTCGCCCGG CAGATTCAGG ATGTTCCGCG AGGCGTGGTG
GGGACAGTCT TTGATGAAGT GGCCCGTGGC TTAGGCTCTC ATGGGGAAGC TGTCGCGGCT
CAGTACTGGT TGCACCAATT GAGCCAGAAT CAATTGAGCC AGAATACTGG GGCAAATCCG
CGAACAGCCG ATGAAATCAG GCGCATGGAA GAGTTATCTG CCACGCTCGA TCCTGCCTAT
GCCTGGGAAT GGGAGCATCA GGTCGAGCAG ATTATCGAAC GAATGGAACT ACCGCATGAT
CGGCTCTTTG ACAGCCTTTC TTCGGGGATG AAACGCCGGG TACTGCTGGC TAAATCGCTG
GTGATCGAAC CCGATGTGCT CCTGCTCGAT GAACCCACCA ACCACCTGGA TATTGAAGCG
ATTCGCTGGC TCGAAGAATT TCTGCTCCGA TTCTCAGGAA CGTTGATCTT CGTGACACAC
GACCGCATGT TTCTGCAGCG ACTGGCTACG AGGATCATCG AGATTGACCG CGCCCGTCTG
TTCGACTGGA CATGTGATTA TCAGACATTT CTGCAGCGAA AAGAAGCCGC CCTGGCTGCC
GAGGAACATG AACAAGCTCT TTTCGACAAG AAATTGGCTC AAGAAGAGGT CTGGATTCGT
AAAGGTGTCA AAGCTCGTAA CGTCAGGAAT CAAGGGCGCG TCAAGGCACT GATGGAGATG
CGCAAAGAGC GGGCGGCCCG CCGGGCCAAA GTGGGCAATG TCAAAGTTGA GCTTCACCAG
GAGGCTGAGC GATCCGGCAC TGTGGTGGCC TTAGCTGAAA AGGTGAATTA CGAAGTTGGC
GGGCGAACCA TACTGAGAGA TGTGTCAACA CTCATCACCC GTGGCGACAA GATTGGGATT
CTCGGGCCCA ATGGTTGTGG CAAGACGACA CTTTTGCGAA TTCTATTGGG TGAACTCACA
CCTCAATCAG GCAAAATCAA ACTGGGTACC CGGTTGGAGA TTGCTTATTT CGACCAGTTG
AGGGCACAGC TCAATGATGA TCTTTCTGTG CAGGAGAATG TGTCGCCCGG GGCGGACATG
ATTGAGATCA ATGGCCGCCG GAGACATGTC ATTGGGTACC TGGAGGATTT TCTCTTCTCC
CCGGAAAGAT CCAGGACGCT GGTGAAGTAT CTCTCGGGAG GTGAGCGCAA TCGTTTATTG
TTAGCCCGAT TGTTCTCGAA GCCATCGAAC CTGCTGGTTC TCGACGAACC GACCAACGAT
CTCGATGCCG AAACTCTCGA ATTGCTGGAA GACTTGCTGG TCGAGTATCC CGGAACAGTG
CTGCTTGTCA GTCATGACCG GCAGTTCATC AACAATGTGG TCACGCAGAC TCTCGTCTTT
GAGGGCGAGG GTTCCGTCAA TGAGTATGTC GGCGGGTATG ATGACTGGCT GGCCCAGAAG
TCTGTTCGGC AGAACACACC TGTTGTGGCT CAGGCAGCAC CTGTCGCCAA TCAACCGGCA
GCCAAAAAGG GAAAATCTCT GAGCTTTAAG GAAGACAAAG AACTGATTGA GCTTCCTGCC
AGGATTGAAT CGCTCGAGTT GGAGCAGGCA AATCTCGAAA CCCGCATGGG GCAACCTGAG
TTCTTCAAGC AGTCTCCTCA GGATGTGGCG ACTGTCACGG AGAGGTTAAA TCGACTGCAT
CAAGAACTAC AGACCGCTTA CGCCCGCTGG GAAGAACTTG AGGCCAAACG CGGCGGGTCA
ATTTAG
 
Protein sequence
MAVLGLKELS FSYGGKPLIE NATVQVELGE RVCLVGRNGT GKSTLMKLML SELKPDTGLV 
EVQSGIKLAR QIQDVPRGVV GTVFDEVARG LGSHGEAVAA QYWLHQLSQN QLSQNTGANP
RTADEIRRME ELSATLDPAY AWEWEHQVEQ IIERMELPHD RLFDSLSSGM KRRVLLAKSL
VIEPDVLLLD EPTNHLDIEA IRWLEEFLLR FSGTLIFVTH DRMFLQRLAT RIIEIDRARL
FDWTCDYQTF LQRKEAALAA EEHEQALFDK KLAQEEVWIR KGVKARNVRN QGRVKALMEM
RKERAARRAK VGNVKVELHQ EAERSGTVVA LAEKVNYEVG GRTILRDVST LITRGDKIGI
LGPNGCGKTT LLRILLGELT PQSGKIKLGT RLEIAYFDQL RAQLNDDLSV QENVSPGADM
IEINGRRRHV IGYLEDFLFS PERSRTLVKY LSGGERNRLL LARLFSKPSN LLVLDEPTND
LDAETLELLE DLLVEYPGTV LLVSHDRQFI NNVVTQTLVF EGEGSVNEYV GGYDDWLAQK
SVRQNTPVVA QAAPVANQPA AKKGKSLSFK EDKELIELPA RIESLELEQA NLETRMGQPE
FFKQSPQDVA TVTERLNRLH QELQTAYARW EELEAKRGGS I