Gene Plim_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1645 
Symbol 
ID9138346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2124617 
End bp2125063 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRbsD or FucU transport 
Protein accessionYP_003629676 
Protein GI296121898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.337367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAT CCAAACTGAT TCATCCTGAT ATTCTCGCTG TCCTGGGACG GGCTGGGCAT 
CATGCCCGCA TCCTGATTGC GGATGGCAAC TACCCCGCTT CAACAACCAT GGGGCCCAAT
GGGACGCTGA TTTCGTTGAA TCTATCGCCA GGGCTGGTGA CGGTAAATCA GGTGCTCGAA
GCCATACTTT CGGCGATACC GATCGATCAT GTGCATACCA TGGGAATCCC TGCCGATGAC
CCGTATGCAC AATTGGGTGA TCCCCCGGTG TGGAAGGAAT TTTCTGCCAC GATGGCAGCA
GCCGGTCTTT CGATTCCTTT GACACCGATC TCCAAGTGGG ACTTCTACGA AGAAGTGAAA
TCGACCGACC ATGTCCTGAC GATCCAAACC GGAGATGTGG CACTCTGGGC GAATCTGTTG
CTTAAAGTCG GTGTGCGTCA GCCATAA
 
Protein sequence
MLKSKLIHPD ILAVLGRAGH HARILIADGN YPASTTMGPN GTLISLNLSP GLVTVNQVLE 
AILSAIPIDH VHTMGIPADD PYAQLGDPPV WKEFSATMAA AGLSIPLTPI SKWDFYEEVK
STDHVLTIQT GDVALWANLL LKVGVRQP