Gene Plim_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1625 
Symbol 
ID9138326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2101465 
End bp2102463 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003629656 
Protein GI296121878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC ATTGTGTGCG TCGTACCGGC TTTACGCTCA TTGAGCTGCT GGTGGTGATT 
GCGATTATCG CCATTCTGAT TGCACTGCTA TTGCCCGCGG TCCAACAGGC TCGCGAGGCG
GCCCGAAGAA CCCAGTGCCG CAACAACCTC AAGCAGTTTG GTCTGGCACT CCACAACTTC
CACGACACCT ACAACGTGTT CCCAACAGGT ATGTCGGATG ACGATAACCG TAGCTGGGGT
TGGGGTGCCG CCATTCTCCC AGAGTTGGAT CAGGCTCCGC TCTACAACTT GTTGGTTGCG
GATGTGTTGT ACTTTCACCG CGTCCCTGTC AATAGTTCGG GTTATCTCAG GCATGCCAAT
ATCGATGGAA CACCAGCCAA TAACGCCGCG GAAATCAACG GCAATGCCGC TGGTGGTGCT
GCCAGAAACA CACTGGCTGC TTTCGTGTGT CCCTCTGATG TCCTGCCAGC CAAAGATAAT
GATGGATATG CCAAGTCCAA CTATCTGGGC AACATCGGTG GTGAAATCAG CACCACATGC
GCCGATGGTA ACTGGCGTGG CAACAGGCAG ACGGGCATTT TCCTAATGTC GAACAACAAT
GACGACACAT GGTTCACGAA GATGCGTGAT ATCACGGATG GAACGTCGAA TACGGCGATG
CTGGGTGAAG TTTCGATTTC TGCCAACGTC TCACCAACCA ATACAGGTAA CGGAAATTAT
CCTCTCTGGG CAGGCGGCAA CAACAACGCC GGCTGCAATG GTCGCAGCTC AATTGGTGGA
CAGCTTCGAA TCATGGACAA CGTGCTCGAT GCCACAACGG GGCAAGGACT TTATCGCATC
AATGGCGGTT CAGACCAAGG CTTTGGCAGC CGCCATACCG GTGGTGCCCA CTTCCTGATG
GGGGATGGGG CCGTCAAATT CCTGAGCGAG AATATCGACC TGACGCTTTA TCGCGGCATC
GGCTCCAAGA ACGGTGGCGA GACCCTGGGC GAGTTCTAA
 
Protein sequence
MKTHCVRRTG FTLIELLVVI AIIAILIALL LPAVQQAREA ARRTQCRNNL KQFGLALHNF 
HDTYNVFPTG MSDDDNRSWG WGAAILPELD QAPLYNLLVA DVLYFHRVPV NSSGYLRHAN
IDGTPANNAA EINGNAAGGA ARNTLAAFVC PSDVLPAKDN DGYAKSNYLG NIGGEISTTC
ADGNWRGNRQ TGIFLMSNNN DDTWFTKMRD ITDGTSNTAM LGEVSISANV SPTNTGNGNY
PLWAGGNNNA GCNGRSSIGG QLRIMDNVLD ATTGQGLYRI NGGSDQGFGS RHTGGAHFLM
GDGAVKFLSE NIDLTLYRGI GSKNGGETLG EF