Gene Plim_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1622 
Symbol 
ID9138323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2097686 
End bp2098528 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003629653 
Protein GI296121875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.429819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA CGGAAGTGGA AGTCGAGAAA AGACCTTACA GCCCAGAGTG GTTCGAGGAA 
GTTCGTCGCC AACTGGGTGA TATCGTCTGT CGACAACTGG GCATCTACGC CGTTGCCGAT
GACATCCTGC TGAGTGTCGT GATCCCGATT TACAACGAGA AAGATTCTTT CAAAGTTCTT
CTAGACCGGG TGAAAGCCGT CCCCATCCGC AAGGAAATCG TCTTAATCGA CGATTGCAGT
AAAGACGGCA CTCGAGATCA ACTGAAGGAG CTTGAAGCCG AACTGGCCCA AAGCCCGCCC
GATGAATTCA ACAAACTCGT CTTTGCCTAT CACGAAAAGA ATATGGGCAA AGGAGCAGCG
GTCAAAACCG GTTTTTCCAA GACCACTGGC CATATCATTA TCATTCAGGA TGCTGACCTC
GAGTACGATC CTTCAGAGTA CCTGAGGTTG ATTCGACCCA TCATCGAGGG CAAAGCCGAT
GTGGTGTTTG GCAGCCGGTT TCTGGGTGAT CAGGAACATC GAGTGCTGTA TTACTGGCAC
TTCCTGGGGA ACACCGTACT GACCACCCTT TCAAACTGTT TCACGAACCT TAATCTCACC
GACATGGAAA CCTGTTACAA GGTCTTCACA AGGAAAGCTC TCGATTCGAT CTGGCCCACA
CTCAAGCAGA ATCGCTTTGG TATCGAACCT GAGATCACTG CCAAAGTAGC CCGACGGAAT
TTGCGTGTTT ACGAGATGTC GATCAGCTAT TCGGGCCGCA CTTACGAGCA GGGCAAAAAG
ATCGGCTGGA AGGATGGAGT CCAGGCCTTG TATTGCATTG TCCGCTACTG GTGGGCCGAT
TGA
 
Protein sequence
MNLTEVEVEK RPYSPEWFEE VRRQLGDIVC RQLGIYAVAD DILLSVVIPI YNEKDSFKVL 
LDRVKAVPIR KEIVLIDDCS KDGTRDQLKE LEAELAQSPP DEFNKLVFAY HEKNMGKGAA
VKTGFSKTTG HIIIIQDADL EYDPSEYLRL IRPIIEGKAD VVFGSRFLGD QEHRVLYYWH
FLGNTVLTTL SNCFTNLNLT DMETCYKVFT RKALDSIWPT LKQNRFGIEP EITAKVARRN
LRVYEMSISY SGRTYEQGKK IGWKDGVQAL YCIVRYWWAD