Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1620 |
Symbol | |
ID | 9138321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2094121 |
End bp | 2095914 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ribosomal protein S1 |
Protein accession | YP_003629651 |
Protein GI | 296121873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGACC GTCATCTGCT TCGCGAATAT TCCATCAGCG ACGACGAACT GGATCAGGCA TTTGCCGCCT CGCTCGGCCT TGAAGATGCT GGCCTGGATC AAGAAGAAAT TGATGCCCTC TACACGCCTC ACGGCGAAAC CTACGATGTC AATTCGATCA TCGAAGGGAC TGTGATCCGC ATCGAAGGCG ACGAAGTTCT CATCGATATC GGCTACAAGA GCGAAGGGAT TGTTCCCCGC GACGAATGGT CGGATGAAGA CGAACAGCCA ATTCCCGGCA TGCGCATTGC CGTGCTCCTC GAAGAAATCG AGGATGAATT CGGTCTGATT ATGCTTTCCA AGAAGAAAGC CGATCGGATC CGTGAGTGGG AAAAGGTCAT TCGCGAGCAC AAAGAAGGCG ACGTCGTCAA GGGCGAAGTC GTTCGCAAGA TCAAGGGTGG TCTGCTCGTC AACATTGGCG TCAACGTCTT CCTGCCTGCT TCTCAGGTGG ATATCCGTCG CCCACACGAT CTTGACTCGT ACAAAGGCCG CTCGATCGAG TGCCTCATTC TCAAGATCGA TGAACAGCGC CGCAACATTG TGGTCTCTCG CCGCCGCCTG ATTGAAGAGC AGCGCGAGAA GATGAAGAAG ACCCTGCTGG CCGACCTCAA GGAAGGCGAA ATCCGCAAGG GAACCGTCAA GAACATCGCC GACTTCGGTG CGTTCGTTGA CCTCGGCGGT ATCGATGGCT TGCTGCACAT TACAGATATG AGCTGGGGCC GTATTGGTCA CCCGAGCGAA ATGGTCAAGA TTGACGATGA AGTCGAAGTG ATGATTCTGC ACATCGACCG GGATCGCGAA AAGATCGCTC TCGGCCTGAA GCAGAAGGAC AAGAGCCCCT GGGACGATGT CGAAACCAAG TACCCGGTTG GCACGAAAAT CAAGGGCGAT GTTGTCAACG TGATGAGCTA CGGCGCATTC GTCAAGCTCG AAGACGGCAT CGAAGGCCTC GTGCACATCA GCGAAATGTC GTGGACGAAG CGCGTCAATC ACCCATCGGA ACTGGTCAAC CCTGGCGACG AAGTCGAAGT GGTTGTACTG AATATCAACA AGGACAAGCA GGAAATTTCG CTGGGGATGA AGCAGGCAAT GCCCAATCCC TGGGATCAGG TTTCTGCCAA GTACCCACCA GGTACAATTG TCGAGGGAAC TGTTCGCAAC CTCACCAATT ACGGTGCTTT CATCGAGCTC GAAGAGGGTG TCGACGGTCT GTTGCATGTC AGCGATATGT CCTGGACACG CAAGATTTCG CACGCCAACG AAATGCTCAA GAAGGGCGAT CTGCTCAAGT GCCAGGTGAT CTCGGTCGAC GAAGAGCGGA AGCGAATTGC CCTGGGTCTG AAGCAGCTTG ACGAAGATCC ATGGGAAAAC CGCATCCCCA CGAAGTACCA GCCTGGTGAA GTTGTCACCG GCAAGGTGAC GAAGATCACC AACTTTGGTG TCTTTGTGGA ACTGGAATCA GAACTCGAAG GTCTCCTCCA CGTTTCCGAG CTGGCCGATC AGAAGATCGA GAACCCGGAA ACCTTCGTGA AGGTGGGCGA CGAATTAGAA GTTCGTATTC TGCGAATCGA CCCAGTCGAT CGTAAGATCG GCCTGAGCCG AAAGACCAGT GGCGAATTGC CGACCGAAGA GAGCAAACCA GCCGAACAGG CAGCCGCAGC ACCTAAGCCG CGCGCTGAGC TCAAGGGTGG CACCGAAGGG GCAGCCGGCC CACTCTTCAG TATGGGTGGC GATACAGGAT CGACTGAAGG TTAA
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Protein sequence | MVDRHLLREY SISDDELDQA FAASLGLEDA GLDQEEIDAL YTPHGETYDV NSIIEGTVIR IEGDEVLIDI GYKSEGIVPR DEWSDEDEQP IPGMRIAVLL EEIEDEFGLI MLSKKKADRI REWEKVIREH KEGDVVKGEV VRKIKGGLLV NIGVNVFLPA SQVDIRRPHD LDSYKGRSIE CLILKIDEQR RNIVVSRRRL IEEQREKMKK TLLADLKEGE IRKGTVKNIA DFGAFVDLGG IDGLLHITDM SWGRIGHPSE MVKIDDEVEV MILHIDRDRE KIALGLKQKD KSPWDDVETK YPVGTKIKGD VVNVMSYGAF VKLEDGIEGL VHISEMSWTK RVNHPSELVN PGDEVEVVVL NINKDKQEIS LGMKQAMPNP WDQVSAKYPP GTIVEGTVRN LTNYGAFIEL EEGVDGLLHV SDMSWTRKIS HANEMLKKGD LLKCQVISVD EERKRIALGL KQLDEDPWEN RIPTKYQPGE VVTGKVTKIT NFGVFVELES ELEGLLHVSE LADQKIENPE TFVKVGDELE VRILRIDPVD RKIGLSRKTS GELPTEESKP AEQAAAAPKP RAELKGGTEG AAGPLFSMGG DTGSTEG
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