| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1613 |
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| Symbol | |
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| ID | 9138314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2087079 |
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| End bp | 2088488 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003629645 |
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| Protein GI | 296121867 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCAA ATCTCTGCCA GTTTCGGGCC AATCAAGTAC CGAAACCTCT GGGAATTCAA
CTCATCATGA AGCGACTCTT GAACTCAAAC CGGTTGAGTC TGGGCACATT CTCGTTGCCG
AAATCTTCTC ATGTCTTAAT CCTCTGCTCG ATGATCTGCC TTGCCGCCAG TTGTTCACCC
CAGACAAAGA TCATCAACGT CGGGCCGCGT CCGGTGAAGA CTCAAGTCAT TACTTCAGTG
GCAGATCTTC GTAGTCGCAC ATTTCCTGGC AAAGTCGAAG CCTCTCAACG GGTTGAACTT
GCCTTTCAGG TTTCCGGATT ACTGGTTGAT CTTCCCGTTA AGGAAGGTCA GCGCGTCGCC
AAAGGCGAAC TCATCGGTCA ATTACGTCAG GATGAATTCA AGGCACGAGT TGCCACTCTG
CAGAGCCAGC TCGATCAGGC ACGCGCAGGA CTGGCAGCAC TGATGCAGGG TGAACGGGCC
GAAGAACGTC TCCGGCGTGA GGCCCAGGTG CGTGCTGCTC AGGCCCGCCT GTCGAAAACA
CGAACAGAGC ACGAACGCAA CACGCGTCTC GTCACCACCA ATGTGGTCAC TCGGGCTCAG
TACGAAATGT CGGAAGCGGC TTACCGTGTC GCTCAGGAAG AGCTCAAGGC TGCCGAGCAA
CTTGTTGCGG CAGGAAGCAT TGGTCGAGAA GAAGATATTC AATCACAAGA AGCCATGATT
CGCGGGCTGG AAGCTCAACT GGTGGAGGCA AACCTCAATC TTCAGGACAG CACGCTCCGA
GCTCCTTACG ATGGTGTGAT TGCTCAGAGA TTTGTTGAAC AGGGCCAGAA TGTGAGGGCC
AAAGAGCCAG TCGTCCGCTT TCAGGATGTT GATGAAGTCG AAATCCTGGT GGATGTTCCC
GAGACAGTCA TGGTGGCAGA CATCACCCGG GCCGACATCG TCTCGCTCTC TGCCACGATC
AGCGGTGCAC CCGGCGTGGC CTTTCCTGTG AGGATTCGCG AGATCGGACA AGTGGCCGAC
CCGGTCACAC AGACATTCAC TGTTCGAGTA GGCATGCAGA CACCGTCAGG ACTGCAAGTT
CTTCCGGGAA TGACTGCCAA CATTCTCGCC ACCTACCGCC GAGCCGAAGT CTTAGGAAGC
AGTCCTCTCC TCGTACCAGT GACAGCACTC AGTCAGTCAG AAGCAGGGAA GCAGATTGTC
TGGCTCATCG ATGAAGAGTT AAAAGCTCAA TCACGAGAAG TCAAAGTGGG TTCAGCCACT
GGCAGTGATA TCGAAATCCT CGAAGGCCTG GCCCCGGGTG ATCGAATTGC TGTCGCCGGT
GTCAAGTTTC TCCGCCCAGG AATGCAGGTT CGTGATCTGG GAGACAGCCT CGCTTCGACT
CCCTCGACCA GCGAAGGGAG CACACGATGA
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| Protein sequence | MHPNLCQFRA NQVPKPLGIQ LIMKRLLNSN RLSLGTFSLP KSSHVLILCS MICLAASCSP
QTKIINVGPR PVKTQVITSV ADLRSRTFPG KVEASQRVEL AFQVSGLLVD LPVKEGQRVA
KGELIGQLRQ DEFKARVATL QSQLDQARAG LAALMQGERA EERLRREAQV RAAQARLSKT
RTEHERNTRL VTTNVVTRAQ YEMSEAAYRV AQEELKAAEQ LVAAGSIGRE EDIQSQEAMI
RGLEAQLVEA NLNLQDSTLR APYDGVIAQR FVEQGQNVRA KEPVVRFQDV DEVEILVDVP
ETVMVADITR ADIVSLSATI SGAPGVAFPV RIREIGQVAD PVTQTFTVRV GMQTPSGLQV
LPGMTANILA TYRRAEVLGS SPLLVPVTAL SQSEAGKQIV WLIDEELKAQ SREVKVGSAT
GSDIEILEGL APGDRIAVAG VKFLRPGMQV RDLGDSLAST PSTSEGSTR
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