| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1607 |
|---|
| Symbol | |
|---|
| ID | 9138308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2078211 |
|---|
| End bp | 2079410 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_003629639 |
|---|
| Protein GI | 296121861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TGCTGCAACT CAACGATGCC ACTCACATCA AAAGGAACTT CTGGAGGATT
GCCGAAGGTG TGACTTACCT CAATCACGGT TCTTTTGGCC CGACTCCTCT TCCCGTCCAG
GAGGCCCGGC AGCAATGGTC GCAACGCCTT GCCGCCAATC CTATGAATGG CTTCGTCCGC
GAACTGGATC ATGAAGTCGA GCAGGCGAAA GCCGCTCTCG CCAGTTTCCT GAAATGCTCT
CCCAATGACC TGCTGTTTAT CGAAAACGCT ACCACCGCCA TGAACGTTGT CGCCGCCTCG
TTCGAACTGA GGCCCGGCGA CGAAGTCCTG TTCAACGACC ACGAATATGG AGCCGTCCGC
CGCATCTGGG AACGAGCCTG TACAGTCGCC GGTGCCAAAC TCGTGACGTC TAACCTGAGG
CCATTTCACG ATCCCTCAGA TGTTATCGAG CCCCTGCTCC ACGCCGTCAC ACCGCGCACT
CGGCTCGTTA TTCTCAGTCA TGTGACATCC GCAACCGCGA CCGTTTTCCC CGTTCGCGAG
CTGATGGCCG AATTCAAGCA GCGGGAGATT CCCGTCGTCA TTGATGGCCC GCATGCCATT
GCCATGCAGG ACTTTTCACT GGGAGAACTA GGAGCGGCCT TTTATTGTGC AAGCCTGCAC
AAGTGGCTCT GTGCTCCCTT AGGAACTGGC TTCCTTTACG TCGCACCGGA ATGGCAAGCG
AAGGTCCGTG CTCCCATGCT GAGTTGGGGC CGCCCTGTCG CAGGACGTGC CGCAGCCTGG
CAGGATGAAC TTCGCTGGCA AGGCACTCGC GACCCAGACC ACTACCTCGC GGTGCCGACA
GCGATCCAGT TCATGGAATC GTTTGGCCTC GATCACTTCC GCAAGCGGGG TTTCGCCCTT
GCCTGCGAGG CCCGAGCCAT GCTGGAAGAC CTCTTCGGCA CCAAAGCGAT CGCTCCAGCG
GACATGGCGT GGTGTGGCAC GATGGTCGCG GTCCCCTTGC CTCCCAGCGA GTTGCCACTC
CCGAAGGCCG ACTCCGACCC GCTTCAGGTT GGCCTCTGGG AAACAGCCCG TATCGAGGCC
CCCGTCATGT TCTGGAACAA CACCCGCCAC CTTCGCATCT CCTGCCACCT CTACAACGAC
CGCCAGGATC TCCGCTTGTT GGAAGAAACC CTCAAAAAAC TCCGCGGCCG CTGCTGGTAG
|
|---|
| Protein sequence | MTDLLQLNDA THIKRNFWRI AEGVTYLNHG SFGPTPLPVQ EARQQWSQRL AANPMNGFVR
ELDHEVEQAK AALASFLKCS PNDLLFIENA TTAMNVVAAS FELRPGDEVL FNDHEYGAVR
RIWERACTVA GAKLVTSNLR PFHDPSDVIE PLLHAVTPRT RLVILSHVTS ATATVFPVRE
LMAEFKQREI PVVIDGPHAI AMQDFSLGEL GAAFYCASLH KWLCAPLGTG FLYVAPEWQA
KVRAPMLSWG RPVAGRAAAW QDELRWQGTR DPDHYLAVPT AIQFMESFGL DHFRKRGFAL
ACEARAMLED LFGTKAIAPA DMAWCGTMVA VPLPPSELPL PKADSDPLQV GLWETARIEA
PVMFWNNTRH LRISCHLYND RQDLRLLEET LKKLRGRCW
|
|---|
| |