| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1596 |
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| Symbol | |
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| ID | 9138297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2065852 |
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| End bp | 2067114 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003629628 |
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| Protein GI | 296121850 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0836964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCTG CAGGTACTGC CCGTGATGCG TTATCCGCTG CGATGGTTGA ACGCGTACAG
GGATTGCGTC TACCGCCACC CCCTGCCAAT GCGGGAATCA ACGCTTCCAC CTCGATTGCC
TGGCTGATTG CCACACTATC GATTTCTGGT TTCGTGTTTA TCTTCCTGTT CGCCTTTGTC
TACCAGGTGG GTGGCCCTCG CGGCAGCAAT GCCCCAGCCT CGACGACCGT CGCTGGTGAT
GGGAAGACCA CAACTGCGGG GTCCAAAAAG GATCCCTCAG CTCCTGCAAA CAGTGATGCC
CGTCCCGTCG ACGCTGCTGC TGTCGATCCG GAAGCGATGG TGCTCTTGTC ACAGGGTTAT
ATCATCCCGG AACAGCAGAT TCTGGTCAGC CCGCAGGTGA GTGGCCGGAT TATTGAATTG
AACGTCAAGG AAGGAACTCG CGTGGAAAAA GGATTCGTCC TCGCGAAACT GGAACCCACG
GAATATCGGG CTGATTATGA AGGAGCCAGA GCCAACGTGG CTGCTGCTGA AGCCAGGCTG
GCTGAGTTGC GTGAAGGAAA CCGGCCCGAG GAAATCGCTC AAGCTCAGGC CGAACTGGGC
GAAGCCAAAG CGACATTAAA ACAGCTGGAA CAAACCTTCC GCCGCAATGC CGAGCTCTAC
GGACAAAAGA TTCTCAACAA GCAGGAGTTT GAAGATTCGG AGTCACTGCT CATGGCCCAG
GCCCAGCGCG TGCTCAAGCT GGAAGCGATG GTCAAGCTGG CCGAAGATGG CTTCCGTAAA
GAGCGGAAAC TGGAAGGTGA AGCGAACCTG CATAAAGCGA TGGCAGAACT GGAAAGAGCC
AAGTGGCGCC TGGATAACTG CACGATCGCG GCACCAATCT CCGGCACGAT TCTGAAGAAA
AATGCCGAAG AGGGGAACAT TGTGAACCCC GTAGCTTTCA ATGGCTCTTT CAGTTTGTGC
GACCTGGCCG ATCTTTCGAA GCTCGAAGTC GATCTGACCA TTCAGGAACG GGATATTTCG
AAGGTTTTCC CGGGCCAGAA ATGCAAAGTC CGTTCGGAAG CTTTTCCCGA TCGCGCTTAC
GACGGTGTGG TCTCACGATT GATGCCCATT GCAGACAGAG CCAAAGGGGC CATTCCTGTT
CGTGTGGCGA TCAGTGTCCC AGCCGATGAA GAGGGCATGT ACCTGAAGCC CGAAATGAGT
GCCCAGGTGA CGTTCTATGC CGGAAAAGCA GAAACAAAAC CTGCCACGAT GAGTGCCGAA
TAA
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| Protein sequence | MDSAGTARDA LSAAMVERVQ GLRLPPPPAN AGINASTSIA WLIATLSISG FVFIFLFAFV
YQVGGPRGSN APASTTVAGD GKTTTAGSKK DPSAPANSDA RPVDAAAVDP EAMVLLSQGY
IIPEQQILVS PQVSGRIIEL NVKEGTRVEK GFVLAKLEPT EYRADYEGAR ANVAAAEARL
AELREGNRPE EIAQAQAELG EAKATLKQLE QTFRRNAELY GQKILNKQEF EDSESLLMAQ
AQRVLKLEAM VKLAEDGFRK ERKLEGEANL HKAMAELERA KWRLDNCTIA APISGTILKK
NAEEGNIVNP VAFNGSFSLC DLADLSKLEV DLTIQERDIS KVFPGQKCKV RSEAFPDRAY
DGVVSRLMPI ADRAKGAIPV RVAISVPADE EGMYLKPEMS AQVTFYAGKA ETKPATMSAE
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