| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1595 |
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| Symbol | |
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| ID | 9138296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2057839 |
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| End bp | 2065143 |
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| Gene Length | 7305 bp |
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| Protein Length | 2434 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003629627 |
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| Protein GI | 296121849 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGAT CTGAAATCAC GATTCGTGGT GCCCGAGAAC ATAATCTGCG TGACGTCAGC
CTGGTTTTGC CCAAGAACAA ACTGATTGTT ATGACGGGCG TCAGTGGCTC GGGCAAGAGC
TCTCTCGCCT TTGATACGCT CTACGCCGAA GGTCAACGGC GGTACATCGA ATCCCTCTCG
ACGTACGCGA GGCAATTCCT GGGATCGATG CCCAAGCCGG ATGTCGATTC GATCACCGGG
CTGGCTCCTT CGATCTCGAT TCAACAGAAA ACGGCTGGTC GAAATCCGCG CAGTACCGTG
GGTACGATCA CCGAGATATA CGATTACCTG CGAGTGCTGT TTGCCCGGGT TGGCCAAGCC
GAATGCCACC AATGCCATCG CCCGATCACT TCCCAGTCTC CTGAGAACAT CGTCGAGCAG
ATTCTCATTT TACCTGCCGG AACAAAGTTT CAGATCCTGG CACCACTCAT TCAGCGTCAG
AAGGGTGAGT TTAAGGATCT TTTCGTTGAT CTTCTCAAGC AGGGTTATCT CCGCGCCAGG
GTTGATGGCA AATTCATTTC GCTGAGCGAA AGTCTGCAGC TTGATAAGCA GATGAAGCAC
ACGATTGATG TGGTGATTGA CCGCCTGGTG GCCGGGAAAT CGACTCGCCA GCGTGTGGCC
GAAGCTGTAG AAAATGCGCT CAAACTGGCG AATGGGCAAC TCATTGTTTT GCAGGATTCT
CCCGAAGAAT TCCTCTCTGC CGCTATTCAG AGTGAAGACG ATTCGCCGTC TCAGGAGAAT
CCGAGCGAAC AGTTTTTTGC CACGGCTTAT GCCTGCACCC ATTGCGGTAT CAGTTACGAT
CCTCCCTCGC CGCAACTTTT CAGTTTCAAC AGCCCTCAAG GGATGTGTGC CGACTGCAAC
GGTCTCGGGA TGCGGCACGA TTTTTTACTT GATCGGCTCA TTCCCGATGA ATCCCTTTCT
ATCCAGAAGG GAGCACTCGC ACTTTCAGGT AAACTTTCCA AGCTGGGCCG TTGGCGCAGG
CATCTCATTG ATGGCGTGGC TGCGGCGATT GAAAAAACAC TGAGCCTCAA GCCCGGTGAG
TTCCTGAAAA CCCCGTGGAA TGAACTGCCC CAGGGGGCGC GCGATCTCTT CCTGGATGGG
CTGGGCAATC AGCATGTGAC GTACAGTTTC AAGCACTCGG GCGGAGTGTG GAAGCATGGT
GGGAAGTACA CAGGCTATGT CCGCGAACTG CTCGAAGAGT ACCGTAAAGC CAAAAACCCG
ATGCGCCGCA GGCAGCTTGA AAAGTATATG GAAGTCGTGG GGTGCAGCAC TTGCCACGGT
TCGCGACTCA ACGCTCAGGC CTGCAACTAT TTTATCTCCA GCCAAGCATT GGAGATGACT
ACGCCGGCGA TAGCACGCAG CGGTTCCTCA TCGGCGGCTT CCCAGGCGAA AAAACAGCGT
CTGTCACTTC CTGGGGTTTG CCATCTCAGT GTGGGTGAAG CTTTCGAGTT TTTTGAACAG
CTCGATCTGG ATCCGACTTC GCAATATATC GCTGAAGAAG TTCTTAAAGA GATTCGTGGC
CGCCTGGGTT TTCTTTTGCG CTGCGGTCTC GATTACCTCG CGCTGGATCG GACGGCACCG
ACGCTCAGTG GTGGAGAAAG TCAGCGGATT CGTCTGGCTG GGCAGATTGG CTGTGGCCTT
GTGGGTGTGG TTTATATTCT CGATGAACCA TCGATTGGCC TGCACCCTCG CGATAACGAA
ATGCTGCTGG GGAGCCTGCA GGATCTTCGC GATCAGGGTA ATACCGTGAT CGTGGTGGAG
CATGACGATG AAACGATGAA GGCTGCCGAT CACATTATCG ACTTTGGCCC CGGCCCCGGT
GTTCGTGGTG GAAAAGTTGT TCATGAAGGG AGTCTTGAGG CACTTCTGGC GAATGAAGAA
AGTGAAACGG GAGCTTATCT CTCCGGCCGC AAGCAGATCG AAATCCGCGA AACACGTCGC
TCAGGAATAG GAACATCCAT CTCGATACAA GGTTGCACGC ATCACAACCT GCAAAATGTC
GATGTCGAGT TTCCACTGGG GAAGTTCATC TGCGTGACCG GTGTTTCCGG TTCAGGGAAG
AGCTCGCTGA TTAACGATAT TCTGTGGCCG CTGCTCAATC GCGAAGTCAA TCTTGGTGAA
GGTGCTCCCG GTGCTCATCA GAGTTTTGAC AATCTCGCAT TGGTCGATAA GGCCATCGAT
ATTGATCAGT CACCGATTGG TCGTACACCC CGGTCGAACC CTACCACCTA TGTCAAACTC
TTCGACCTGA TTCGTGATCT TTACACACAA CTTCCCGATT CTAAAACCCG CGGGTTTAAG
CCGGGACGCT TCAGTTTTAA CGTCCCTGGC GGTCGTTGCG AGGCCTGCGA AGGGCATGGT
TCGAACAAGC TTGAAATGGA CTTTCTTGCC GATATCTGGG TGACCTGCCC GGTCTGCCAG
GGACGCCGAT TTAATAAAGA GACGCTGGAG GTGCGTTTCA AGGGTAAGAA CATTGCTGAA
GTCCTCGATA TGGATGTTCA GACGGCACTT GAACATTTTG AAAACCTCCC CAAGATCAAA
AATCTGCTGC AGACTTTGCA CGATGTGGGC CTCGACTACA TCAAGCTGGG GCAGCCCTCT
CCTACCCTCT CTGGTGGTGA AGCTCAGCGG ATTAAACTCG CGAAAGAACT TGGCAAACGC
AGCACTGGCA AAACCGTCTA CATTCTCGAC GAACCGACAA CTGGCCTGCA CTTCGTTGAT
ATCGCCCACC TGCTGCGGGT GTTGCATGGC TTTGTGGATG CCGGGAATAC CGTCATTGTC
GTGGAGCATA ATCTTGATGT CATCAAGACG GCCGACTGGG TGATCGATCT GGGGCCCGAA
GGTGGCAAAG GTGGTGGCAG GATTATCGCA CAGGGGACAC CAGAAATGGT GGCCCAATGT
GAGGCCTCAT ACACGGGTCG CTTTCTGGCC AGAGTCCTTG AGGCGAGCGG TCGATCAATA
TCTCAGCCCG TTTCACTGGG GTCCGCAGCC ACCTCCACTG GCAAGGGGCA GGGAACGAAG
AAAAGACGCA AAAGCACGGC AGATCACGTG GTTGAGATGC CACAAAAAAG TGTGGCTCGA
ACTTTTCCTC CTGAGACAAA AGTCGCTTCA CCTTCCCGCT GGCAAGCAGC TTTGCCACTC
AAGCAGCAAG ACCGTGAAGC ACAGACCAAC ATCGTCATTC GCGGGGCCTC CCAGCACAAC
CTGCAGAAAA TCAGTCTCGA TATCCCTCGC GATCAGATGA GTGTCTTCTG TGGCCCCAGT
GGTTCCGGCA AAACGTCACT CGCCATGGAT ACGCTCTACG CGGAAGGCCA GCGGCGATAC
GTCGAGTCCC TTTCGTCGTA TGCCCGGCAG TTTCTTGGTC AGATGCCCAA GCCCAAAGTC
GAGCATATTC ACGGTCTTCA GCCTTCGATT GCGATTGAGC AGAAGACGGT CGGCCACACG
CCGCGCTCGA CGGTCGGCAC CACGACGGAA ATTTACGATT ATCTGCGTGT CCTCTATGCC
CGCCTGGGAA CGCAACATTG CCCCGACTGT CGCATCGCGG TGGAATCGCA AACCACCGAC
GATGTGATCG ATCTCCTCAT GGCCAAGCCG GAAGGCACCA GACTGCTGGT TCTGGCACCG
CAGGAAGTTC CCGTTGGCCA GCAGTACGCC AAAGTGTGGG AACGGCTGAA AGAACAGGGC
TTCAGCCGGG TACGTGTGGA CGGCACCACC TATCGACTGG AAGAAGTTCC CGAAATCGAC
CGCCGGCGAA AGCATGTCGT CGAAATTGTC ATTGATCGCG TCACGATTGC CTCGGGCAGC
CGCCGCCGTC TGGCTGATTC TGTCGAGGCA GCCTTTGATC AGGGCAAAGG CGTGATTCGT
GTCGCCTTCG TCGATGACGA CAAGCCGGAG AACTCGTGGA AAGTTCAGCC CTTCAGTCTG
TTTCGTGCCT GCTCGCAATG CGGCAGAAGT TTTGAGACAT TGGCACCACA CAACTTCTCG
TTCAACAGTC CCTTGGGATG GTGCGAAAGC TGTGAAGGTC TGGGCACTCA GCAGGGCACG
AACCTTGCGG CTCTCATTGG TGATCCCACA CGAACTTTAC GCGAAGGAGC CATTTCGGCC
TGGCCAGACC CTCGGCAATC TCCCGCAATG TTCGAACTGT TGGACGCCCT GAGCCGGGGA
GTCGGCCTTT CGCTCGACAC GCCATTTAAT CAGCTCGAAC CGGCTGAGCA GCGACTGGTT
CTCTTCGGGG CTGGCGAGCA GTGGTTCACG GTTTACCAGG TGGCTCAGCC CGCAGCGGCC
AAAAAGTCGA GCACCAAAGC AGCAGCGAAA TCGAAGAAAT CATCCACGGC CGATCAAGCC
GTCAAATACC GCTTCCAGTT CAAAGGGCTG TACCCGGCTC TCGAAGAAGC CTCACGCGTT
TCGTACTCAT TCCGCCAATC GCTGTTCGAT TTGATTGGTG AAGTTCCCTG CTCTTCATGC
AGTGGCAGCC GCTTGAGAGA AGATGCCTCT GCCGTGCGCC TGCAAGGGAA GACTTTGCAG
CAGTTGTGCG AATTGCCACT CAATAAAGCT CAAGAGTTTC TGCATGGACT TACACTCAAC
AAAACCCAAC AGAAGATCGC GGGAGACCTG CTGGAAGAAG GGGCTGGTCG CCTTGATTTT
CTGGTTGATG TCGGTCTGCA TTACCTCACC TTGAGCCGCA CACTTCCGAC GCTATCCGGC
GGAGAAAGCC AGCGGATTCG ATTAGCGGGT CAGTTGGGCC GGGCGTTGAC AGGTGTGCTG
TATGTTCTCG ATGAACCGAC CATCGGGCTG CATCCCAGCG ATAACGGGCG TCTGCTGCAG
GCACTGAAGA AGCTGCGCGA TCTTGGCAAC ACTGTGGTGC TCGTCGAGCA TGATCGCGAA
GTTCTCGCAG CCGCCGATCG ATTGTACGAT TTCGGCCCCG GTTCTGGCAG GTTGGGTGGC
CTTGTCACAG CGGAAGGAAC ACCACACGAG ATCGAACACT GCGACGACTC GCTCACGGGC
AGATTTCTCT CTCTTAAGGA AGATATTCTC GTTCCGACCG AACGCCGTGT CCCTGCGAGG
TTTGGCAGAA GCCAGGCACC AGTTGATCGG GCGAAATCAG GTGCTGCGAC GAAAGGGAAG
GCCAAGGCTC AGGTGGCAGC CACAACCAAG GCTTCTGCAA GCAAGCCTCT CTTCTGGCTG
GAGTTGATTG GGGCCCGCCA GAACAATCTT CGCAATGTTG ATTTGCGGAT TCCTCTGGGG
GCACTGACAG CCATCACGGG TGTGTCCGGA AGTGGCAAAA GCTCCTTGAT CGCCGACACT
CTCGGCAAAG CCATTGCCCG CAAACTGCAT CGTTCGAGCG AACAGCCCGG GCCATACGAT
GAACTTCTCG GGCTGGATTA CCTCAGCAAG TTGATTGTTG TCGATCAGCA GCCACTCGGA
AACACCCCTG CCTCCAACCC CGCGACTTAT ACAGGCGTCT TCGAACACAT TCGTGAGCTG
TTTGCTCATC TTCCTGAATC AAAGGTGCGC GGATATCGAC CCGCCCGCTT CAGCTTCAAC
CGGGCTGGTG GTCGCTGCGA GACCTGCGAA GGGAATGGCC AGAAACTCAT TGAAATGCAC
TTCCTCCCCG ATCTCTGGGT CGAGTGCGAT ACCTGCCACG GACGCCGCTA CAATCCTGAA
ACTCTGGCGG TCAAGTTCCA GGGGAAGAAC ATTGCCGATG TGCTTGAGAT GCCCATTTCC
GAAGCCGTCA AGTTGTTTGA GAGCTTCCCC AAAATTCGCG GGCCGCTGGC AGTTCTTGAT
GCGATTGGTC TCGGTTATCT GACCCTCGGC CAGCCTGCGC CGACCCTTTC CGGCGGCGAG
GCCCAGCGCG TCAAGCTCGC GGCTGAACTC GCCCGTCCCA GTACTGGCAG CACCCTTTAC
CTGCTGGATG AGCCAACGAC AGGCCTCCAT TTTGATGATA TCCGCAAGCT GCTCAAGATC
CTGCAAAGCC TGGTCGATGC GGGGAATACC GTCGTCGTCA TTGAACACAA CCTCGATGTG
ATCAAAACCT GCGACTGGAT TGTTGATCTC GGCCCCGCTG CCGGCAGCGA AGGGGGCTAC
ATCGTGGCGA CGGGAACTCC TGAAGATCTC GTCCGCATCG CTCAAGGGGA AGTTCCAGAT
GATGACCCAT CGAAGAAAAA TCCTCAGCAG CATGTCTCGT TGACTGCTCA ATGTCTCGCC
CCGGTTCTGG AAGCGAGCCG CAAGGGAGCC CGCGAAGTCT TTGATGCGAA GGCCGCCCTC
GCGCGCCGAC GGGATGATCT TGATCTCAAG TCGCTCGGCA AGAGTGCCAA AATGCCCTGG
GAGGTCGATG GCCGCAAGTG GCATCTGGTC GATCACCTGG CCAATTCGGG TCGTCCTGCG
AAATGGCCTG TCTCGCTTCT GGAAACGATC TTTGAACCGT TAGAGGAGGA TTCAGGCGTC
ACTGTTGTCT GGAATGATCG CAGTGTGATT GAAGCTAAAT CGAAAGGGAT TCCCAGCTGG
TTTATTCATG CACTGACGGG CGATGAATGG CTGCTGCAGG CCAAGTTCCG CGTGGCGAAG
GGGACGTTCG ACCAGACGGA ACTCGCTGAA TCTCTCGATC TTCTCGATAT CGACGATCTC
GATGAACTCC CCATTTACAA CCGGGCCGAG CGAGTCCGGG TGAAGGCTAT GGCGGGGGGC
TTGCAGGAGG TCACGATCTC TCTGGCGAAG GCTGATGATG TCGCCACACC TGCCTTCGCC
AGCTTCTTCA AAGAGGCACT GGCCAGCTAT CTTTCGCTGG GCGAAAAAGC CGAGGCGTCG
AATCCCGAAG ACCTGATGCC CTGGAAGAAA CTGGGTCGCA AATGGCACGT CATGCGGAAA
GGTTTTTTGA AGGGGAAAGT GCTCTGGGAA CCGGCCGTTG CCGAGGCTCT GTTTGAATTG
ATGGAGACCA CCTTCCCGGC GGCGGAAGTT GACTGGACGC AGAAGATGCT GGTGAAGTAC
CGCGTGGTTC CTGCCAAGGC AGACGCCAAA GCCGGTGCGA AGCCCCGCGT CCTGGCGAAC
ATCATTACGA AACGCACTGG CAGCCTCGAT CTTGAACTCT TCGCCCCTGC AGGAACCGCC
GGCAGCAAAC CCATCACCCT GGGAGAAATC CGCGACCTGG GTGAAGACCC CGCGATTGAA
ACCAACTCGG ATGGCGAACA AGTCATCAAA CTCAGCTTCG TGACAGCCGA TCAGGTGAAG
AAACCGACGC TATTGAAGCT GTTGAAGAAG CTGGGTGGAA TTTAA
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| Protein sequence | MTRSEITIRG AREHNLRDVS LVLPKNKLIV MTGVSGSGKS SLAFDTLYAE GQRRYIESLS
TYARQFLGSM PKPDVDSITG LAPSISIQQK TAGRNPRSTV GTITEIYDYL RVLFARVGQA
ECHQCHRPIT SQSPENIVEQ ILILPAGTKF QILAPLIQRQ KGEFKDLFVD LLKQGYLRAR
VDGKFISLSE SLQLDKQMKH TIDVVIDRLV AGKSTRQRVA EAVENALKLA NGQLIVLQDS
PEEFLSAAIQ SEDDSPSQEN PSEQFFATAY ACTHCGISYD PPSPQLFSFN SPQGMCADCN
GLGMRHDFLL DRLIPDESLS IQKGALALSG KLSKLGRWRR HLIDGVAAAI EKTLSLKPGE
FLKTPWNELP QGARDLFLDG LGNQHVTYSF KHSGGVWKHG GKYTGYVREL LEEYRKAKNP
MRRRQLEKYM EVVGCSTCHG SRLNAQACNY FISSQALEMT TPAIARSGSS SAASQAKKQR
LSLPGVCHLS VGEAFEFFEQ LDLDPTSQYI AEEVLKEIRG RLGFLLRCGL DYLALDRTAP
TLSGGESQRI RLAGQIGCGL VGVVYILDEP SIGLHPRDNE MLLGSLQDLR DQGNTVIVVE
HDDETMKAAD HIIDFGPGPG VRGGKVVHEG SLEALLANEE SETGAYLSGR KQIEIRETRR
SGIGTSISIQ GCTHHNLQNV DVEFPLGKFI CVTGVSGSGK SSLINDILWP LLNREVNLGE
GAPGAHQSFD NLALVDKAID IDQSPIGRTP RSNPTTYVKL FDLIRDLYTQ LPDSKTRGFK
PGRFSFNVPG GRCEACEGHG SNKLEMDFLA DIWVTCPVCQ GRRFNKETLE VRFKGKNIAE
VLDMDVQTAL EHFENLPKIK NLLQTLHDVG LDYIKLGQPS PTLSGGEAQR IKLAKELGKR
STGKTVYILD EPTTGLHFVD IAHLLRVLHG FVDAGNTVIV VEHNLDVIKT ADWVIDLGPE
GGKGGGRIIA QGTPEMVAQC EASYTGRFLA RVLEASGRSI SQPVSLGSAA TSTGKGQGTK
KRRKSTADHV VEMPQKSVAR TFPPETKVAS PSRWQAALPL KQQDREAQTN IVIRGASQHN
LQKISLDIPR DQMSVFCGPS GSGKTSLAMD TLYAEGQRRY VESLSSYARQ FLGQMPKPKV
EHIHGLQPSI AIEQKTVGHT PRSTVGTTTE IYDYLRVLYA RLGTQHCPDC RIAVESQTTD
DVIDLLMAKP EGTRLLVLAP QEVPVGQQYA KVWERLKEQG FSRVRVDGTT YRLEEVPEID
RRRKHVVEIV IDRVTIASGS RRRLADSVEA AFDQGKGVIR VAFVDDDKPE NSWKVQPFSL
FRACSQCGRS FETLAPHNFS FNSPLGWCES CEGLGTQQGT NLAALIGDPT RTLREGAISA
WPDPRQSPAM FELLDALSRG VGLSLDTPFN QLEPAEQRLV LFGAGEQWFT VYQVAQPAAA
KKSSTKAAAK SKKSSTADQA VKYRFQFKGL YPALEEASRV SYSFRQSLFD LIGEVPCSSC
SGSRLREDAS AVRLQGKTLQ QLCELPLNKA QEFLHGLTLN KTQQKIAGDL LEEGAGRLDF
LVDVGLHYLT LSRTLPTLSG GESQRIRLAG QLGRALTGVL YVLDEPTIGL HPSDNGRLLQ
ALKKLRDLGN TVVLVEHDRE VLAAADRLYD FGPGSGRLGG LVTAEGTPHE IEHCDDSLTG
RFLSLKEDIL VPTERRVPAR FGRSQAPVDR AKSGAATKGK AKAQVAATTK ASASKPLFWL
ELIGARQNNL RNVDLRIPLG ALTAITGVSG SGKSSLIADT LGKAIARKLH RSSEQPGPYD
ELLGLDYLSK LIVVDQQPLG NTPASNPATY TGVFEHIREL FAHLPESKVR GYRPARFSFN
RAGGRCETCE GNGQKLIEMH FLPDLWVECD TCHGRRYNPE TLAVKFQGKN IADVLEMPIS
EAVKLFESFP KIRGPLAVLD AIGLGYLTLG QPAPTLSGGE AQRVKLAAEL ARPSTGSTLY
LLDEPTTGLH FDDIRKLLKI LQSLVDAGNT VVVIEHNLDV IKTCDWIVDL GPAAGSEGGY
IVATGTPEDL VRIAQGEVPD DDPSKKNPQQ HVSLTAQCLA PVLEASRKGA REVFDAKAAL
ARRRDDLDLK SLGKSAKMPW EVDGRKWHLV DHLANSGRPA KWPVSLLETI FEPLEEDSGV
TVVWNDRSVI EAKSKGIPSW FIHALTGDEW LLQAKFRVAK GTFDQTELAE SLDLLDIDDL
DELPIYNRAE RVRVKAMAGG LQEVTISLAK ADDVATPAFA SFFKEALASY LSLGEKAEAS
NPEDLMPWKK LGRKWHVMRK GFLKGKVLWE PAVAEALFEL METTFPAAEV DWTQKMLVKY
RVVPAKADAK AGAKPRVLAN IITKRTGSLD LELFAPAGTA GSKPITLGEI RDLGEDPAIE
TNSDGEQVIK LSFVTADQVK KPTLLKLLKK LGGI
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