Gene Plim_1593 details

Gene Information

• Locus tag: Plim_1593
• ID: 9138294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2053941
• End bp: 2055980
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 51%
• Product: hypothetical protein
• Protein accession: YP_003629625
• Protein GI: 296121847

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0826667
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGA TCAATCAGGC ACTGGCTCCG TACAATTATT ACAACCTGCC GTTCATCCCT 
CAAGCTTTCA CCAACGCGAT GGGAGGCTAT GAACCCTCGT ATCTGGGTGA CTGGCACCTG 
TCGAGTGAAG GCTGGGCCAG TGATACACAG TATTACAAAT ACTACGAGAA CGACCGCACG 
GGGGATTGGC GGATCGATTA CTGGGATCAC AAGCCTGCCG AAAACGAAAC ACCGCAGCGC 
AGCGAATACG GCGGCCCCAG CTATGATTCG ATCCAGCAGC AAGCCTACGC CGCCCAGCAA 
CAGGCCCAAA GCCAGGCCAA CCAGACACCT CCCGATGAAG CCCCCGCTGC CAAGAGTGCC 
GATCAGAACC GACTGGAAGA AGAGCAGTCC GCCAGTGGTT CAGAAGGTGG CTCCTACACA 
CCCTCGAATC CAGTGGCTCC CGGCAATGAA GTGGGTCAAG CCAGCCGGAA TGCCATGGAT 
CGGGCGTACG AGAGATTGGC CGAACAGCAA AGCAATCCCC ACATCCGCGA TCTCCTCAAT 
CGCAACGAAC ACGACCTGGG CACACTGATT GACCGCGCCC CGTACAGACC GTCTGTCGAT 
GTCCCCGTGC TGCAAGAAGT CGGTGAAGTC AAAAAGCCGA CATCCGTGGG CGAAAAAACT 
GCCAATGGGG TCGATATCGA GACGTTGCCG TCGGATCTGA AGAACGGATT ACGAGGGATT 
GCCAAATTCT TCCAGGTGAC TCAAACGGGT GGAAGTATCT ATCAGATTTA TGACAAGAAA 
GGGGAGTACA TTGCCACATA TGTCGAAGGG CGTGGGTTGT CACGGACGGT GGGTGGCAAA 
GTTTACCGGA TGAACGCTCT GCAGTTGCCG CAGATTCTTC AAGAGCGAAA TGACTGGTAT 
GGATTCTCAC TGCTCACGGC ATATGACTAT ATTTTCAGCC AGAATGGCAC ACCACCGCTT 
AACAATAATC CTAACGAGCC TCCCAGTGCA TTGGAGGTTT CTGGAGCGTA TTTTGATGGA 
TTTATGCAAG GGTTCTGGGT CGATAGCGTA GGAGGAGCGC TGAATGGCCT TGCCGAAGCA 
GCACCCGATG CTCTCTATTA CGGCTCGCTA TTTGTTATTC ATCCGGCAAT CGGCTACACG 
GTTCTGGCCC ATGACACTGT CTCTTCGACA ACAGCCACTG TTCAGCATTA TGGCAGCCTG 
TATTACGAAT ATACGGGTCT TGATGAAGAC ACCCAGAAGA AACTTTGGGA TGGAAAGTTC 
GACGAGCTAA CTGGGATTTT AAGCCAAGAA CTGATTGACG TCGCCAGGGA AGCTAAAAAA 
ATTGCCGACT CGATCATGCA GGGGTTTGAG CAGTACAACA ATGACCCTGT CACCCGAGCA 
TATGTGCACG GGCGGGTTCT GGGGATCGTG TTCTTCTCGC TGCTCACTGC CGGAGCAGAC 
AAAGTTGCAG CCGGGTTGAA AGCCGAAGCA ACTCTGGCAA AAATCAAGAC AGTTGTTCCT 
TCAGGGCCCA AGACTAAGGC AGCAGGTGAG AAGCTGAAAA GCTTCTTTCA GCGTGCGGAA 
AATCAACGAA GAACACCTGA TCCTGAGAAA ACCATAGACT TCCAGCTTAT TGGAGACGGG 
CGTCTTGAAT GGAAGTCGTC TGATGGACTG TATACTTTTA GTTCACGAGA AGAATATAAA 
ACATATGAAC TAAATAAGCG TCGGAAGAAG TTGACACAAA TACCGGAAAA TAGCACCTCA 
AATAGGCCAG TGTTTATTGG AACTGAGTAT CCAAAGCTGA CAGGCGCTCA CCCGAACTCT 
ATTCATATAA GACTGTCAAG GGACGGTCGG GCTGTACAAA CTACAATTTT CAATGAAAGA 
GGAGAGGCGA TTGCCCATAT TGACTGGAAG GATAGGGAGG GCCGTTTGTT TACAATTCCT 
GGAAGTCCTA GATCAGGTCA TGGACCAGGC GCACCTCACC TAAAGCTGAC TGACCCTCTG 
ATACCGCCTG ACTGGCAGAT GTTGCCACAG GGTGTAATTC CAGTTCCACA GAGAAACTGA 

 

Protein sequence

MSLINQALAP YNYYNLPFIP QAFTNAMGGY EPSYLGDWHL SSEGWASDTQ YYKYYENDRT 
GDWRIDYWDH KPAENETPQR SEYGGPSYDS IQQQAYAAQQ QAQSQANQTP PDEAPAAKSA 
DQNRLEEEQS ASGSEGGSYT PSNPVAPGNE VGQASRNAMD RAYERLAEQQ SNPHIRDLLN 
RNEHDLGTLI DRAPYRPSVD VPVLQEVGEV KKPTSVGEKT ANGVDIETLP SDLKNGLRGI 
AKFFQVTQTG GSIYQIYDKK GEYIATYVEG RGLSRTVGGK VYRMNALQLP QILQERNDWY 
GFSLLTAYDY IFSQNGTPPL NNNPNEPPSA LEVSGAYFDG FMQGFWVDSV GGALNGLAEA 
APDALYYGSL FVIHPAIGYT VLAHDTVSST TATVQHYGSL YYEYTGLDED TQKKLWDGKF 
DELTGILSQE LIDVAREAKK IADSIMQGFE QYNNDPVTRA YVHGRVLGIV FFSLLTAGAD 
KVAAGLKAEA TLAKIKTVVP SGPKTKAAGE KLKSFFQRAE NQRRTPDPEK TIDFQLIGDG 
RLEWKSSDGL YTFSSREEYK TYELNKRRKK LTQIPENSTS NRPVFIGTEY PKLTGAHPNS 
IHIRLSRDGR AVQTTIFNER GEAIAHIDWK DREGRLFTIP GSPRSGHGPG APHLKLTDPL 
IPPDWQMLPQ GVIPVPQRN