Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1578 |
Symbol | |
ID | 9138278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2032212 |
End bp | 2033258 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | 3-dehydroquinate synthase |
Protein accession | YP_003629610 |
Protein GI | 296121832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.186801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTCC CCACAATTTC ACTTCCTGCA TTACTGCGAA TTAAGCCCGG TGCAATGAGC CGGCTGGGAA TCTATCTGAC AAGAGAAGAA TTCCGGGAGA TCGCTCTCTT CAGCAGCACG GGAATGCAAG CCCCGATTCT CGATGAAGTC ACAAGATCGT TAGATACTAA GGGCGTTGCC ATTCGTGATC GCGAAGAGGT CGCGGATTCG ACCATCGAGA ATGCGTTGCG ACTTCTGGGG CGACTTCCGG CTGACGTCCA AGCGGTTGTT GGTGTTGGCG GTGGCAAAGC CCTGGATGTG GCGAAATTCG TGGCTCATCT GGCGAATCGA CCCTACATCG CTGTCCCGAC ATCGTTGTCG AACGATGGTT TCTGCAGCCC TCAGGCCAGC CTGACGCTTG ACGGGCATCG AAAATCCATA GGAGCCCGCC TGCCATTTGG AGTCGTTGTC GATACGCAGG TCTGTCTGGA AGCTCCACGC TCTTTGTGGC TTTCCGGGAT TGGAGACCTG ATTGCCAAGT TCACTGCCGT TTACGAGTGG AAGGCTGCGT TTCATGCCCG GGGTGAATCT GTCAACGATC TGGCTGCGCT CCTCTCGGAT GCGACTGTAC GGCAATTTCT TTCCAGACCC ACCCACGATC TGGAAGGTAT CCGTCTGCTG GCGACGGCCC TGATGCTCGG CGGAATCTCA ATGGAAATCA GCGGCACATC CAGACCTGCC AGTGGGAGTG AACATCTCAT TTCGCATGCA CTCGACGAAA TTTCTTCGAG GCCCAGGTTG CATGGCGTGC AGGTGGGGAT GGCGACCTAT CTGATGTCGA CCATCATTGG CCAACACACA GAGGAAATTC GAAAGTTGTT GACTGAAACC GGATTTCTTG ATCTGGTGCG AGAAGATCCG TTCGACGGGG AAGAATGGCG TGCCGCCATT CAGAAAGCGC CGTCGATCAA ACCCCACTAC TTTTCATTGC TCAATACTCC CGGAAATCAG GAGAAACTGC TAAGCACCAT GCGGAATGAT CCGACACTTG TCGGCTGCTT TCGATAA
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Protein sequence | MLVPTISLPA LLRIKPGAMS RLGIYLTREE FREIALFSST GMQAPILDEV TRSLDTKGVA IRDREEVADS TIENALRLLG RLPADVQAVV GVGGGKALDV AKFVAHLANR PYIAVPTSLS NDGFCSPQAS LTLDGHRKSI GARLPFGVVV DTQVCLEAPR SLWLSGIGDL IAKFTAVYEW KAAFHARGES VNDLAALLSD ATVRQFLSRP THDLEGIRLL ATALMLGGIS MEISGTSRPA SGSEHLISHA LDEISSRPRL HGVQVGMATY LMSTIIGQHT EEIRKLLTET GFLDLVREDP FDGEEWRAAI QKAPSIKPHY FSLLNTPGNQ EKLLSTMRND PTLVGCFR
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