Gene Plim_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1578 
Symbol 
ID9138278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2032212 
End bp2033258 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID 
Product3-dehydroquinate synthase 
Protein accessionYP_003629610 
Protein GI296121832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.186801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTCC CCACAATTTC ACTTCCTGCA TTACTGCGAA TTAAGCCCGG TGCAATGAGC 
CGGCTGGGAA TCTATCTGAC AAGAGAAGAA TTCCGGGAGA TCGCTCTCTT CAGCAGCACG
GGAATGCAAG CCCCGATTCT CGATGAAGTC ACAAGATCGT TAGATACTAA GGGCGTTGCC
ATTCGTGATC GCGAAGAGGT CGCGGATTCG ACCATCGAGA ATGCGTTGCG ACTTCTGGGG
CGACTTCCGG CTGACGTCCA AGCGGTTGTT GGTGTTGGCG GTGGCAAAGC CCTGGATGTG
GCGAAATTCG TGGCTCATCT GGCGAATCGA CCCTACATCG CTGTCCCGAC ATCGTTGTCG
AACGATGGTT TCTGCAGCCC TCAGGCCAGC CTGACGCTTG ACGGGCATCG AAAATCCATA
GGAGCCCGCC TGCCATTTGG AGTCGTTGTC GATACGCAGG TCTGTCTGGA AGCTCCACGC
TCTTTGTGGC TTTCCGGGAT TGGAGACCTG ATTGCCAAGT TCACTGCCGT TTACGAGTGG
AAGGCTGCGT TTCATGCCCG GGGTGAATCT GTCAACGATC TGGCTGCGCT CCTCTCGGAT
GCGACTGTAC GGCAATTTCT TTCCAGACCC ACCCACGATC TGGAAGGTAT CCGTCTGCTG
GCGACGGCCC TGATGCTCGG CGGAATCTCA ATGGAAATCA GCGGCACATC CAGACCTGCC
AGTGGGAGTG AACATCTCAT TTCGCATGCA CTCGACGAAA TTTCTTCGAG GCCCAGGTTG
CATGGCGTGC AGGTGGGGAT GGCGACCTAT CTGATGTCGA CCATCATTGG CCAACACACA
GAGGAAATTC GAAAGTTGTT GACTGAAACC GGATTTCTTG ATCTGGTGCG AGAAGATCCG
TTCGACGGGG AAGAATGGCG TGCCGCCATT CAGAAAGCGC CGTCGATCAA ACCCCACTAC
TTTTCATTGC TCAATACTCC CGGAAATCAG GAGAAACTGC TAAGCACCAT GCGGAATGAT
CCGACACTTG TCGGCTGCTT TCGATAA
 
Protein sequence
MLVPTISLPA LLRIKPGAMS RLGIYLTREE FREIALFSST GMQAPILDEV TRSLDTKGVA 
IRDREEVADS TIENALRLLG RLPADVQAVV GVGGGKALDV AKFVAHLANR PYIAVPTSLS
NDGFCSPQAS LTLDGHRKSI GARLPFGVVV DTQVCLEAPR SLWLSGIGDL IAKFTAVYEW
KAAFHARGES VNDLAALLSD ATVRQFLSRP THDLEGIRLL ATALMLGGIS MEISGTSRPA
SGSEHLISHA LDEISSRPRL HGVQVGMATY LMSTIIGQHT EEIRKLLTET GFLDLVREDP
FDGEEWRAAI QKAPSIKPHY FSLLNTPGNQ EKLLSTMRND PTLVGCFR