| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1571 |
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| Symbol | |
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| ID | 9138271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2024150 |
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| End bp | 2025646 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003629603 |
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| Protein GI | 296121825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGA ATCTGCCTCA ATTTCAGAAG CGAGCTTTCA CCAGACGCGC TGCCATTTCG
CTCGCAGGTC GTCATGTGAC TGTCCTGGGT TTAGGGACTC TGGGCGGGGC TGTCGAAGCT
GTCAAGTTTC TGGCAGCACA AGGGGCCATC GTTACTGTCA CTGATGAGAA GCCCGCCAGC
AAGCTGGCTG CCAGCCTGGC CGAACTCGCC CAGATACCGA TTCATCGGTT TGTGCTCGGT
GGGCATGATG ACGATGACTT TCGCAAGGCT GACTTAATTG TCGCCAACCC TGCCGTTCGA
CCAGATCATC GATTGTTGAA ACTGGCACGA GATGGTGGCA TTCCGATTAC CACAGAGGTG
CAACTCTTTC TCGAACGGTG CCCGGCACCC GTCGCGGCGG TGACTGGAAG TAATGGAAAG
TCGACCACCA CGGCCATGCT GCATCGTATC TGCGAAATGG CCAGTGGATC GCCGGGCCTT
CGACGAGCGT GGCTGGGTGG GAACATCGGC GTCAGCCTGC TCGATCAACT CCCCGCAATA
ACCAGCGATG ATCTCGTGGT GATGGAGTTG AGCAGCTTTC AGCTGTACTG GCTGAATCAG
ATCGAATGGA GTCCGAGTAT CGCCATCGTG ACCAACTTTT CAGCCAATCA TCTTGACTGG
CATGACGGTC TCGATGATTA CCGATCTGCC AAGCAGACGA TGTTTCGCTG GCAGAATGAA
AGCGATGTTG CGGTGATCAA TCTTGATGAT CCGGATGTCT GTCAATGGCC CGGCCCAGCC
CTGCGACTGG GGTTTCAGAC AGGTTCAAAC TGCTCTGATG TCACGACGAA ATATGGTGTT
TTCTCAGAAT CAGAAAAGGA AGGTTGTTTG CCTTCACAGA TTCTGCGTTT GCCTGATGCA
GAGATCCGCT TGGCTGCCTC GAGCTGGCTA CGAGTCAAGG GCGAACATAA TCTGCAGAAT
GCCATGGCCG CGATTGCGGC GGCATCGGTG ATGGATATCC CCATGGAAGT CATCGAAACA
GCACTTCGCA GTTATCAGGC ACTTCCTCAT CGACTGGAGT TTGTTGGAGC ATGCGCAGGG
CGTGAATTCT ATAACGACTC GCTGGCGACG ACTCCGGAAT CGGCGATTCT CGGTCTAAAG
GCATTTTCTC AGCCAGTGAT CCTGCTCGCG GGAGGTTATG ACAAAGGTGT CGATCTTTCA
TCGATGTCAA AAGTGATTTC AAAAGCTTGC CGGGTGGTGG TTCTGATGGG GCAAACAGCC
CCAGCCATTC ATGAACAGAT TGAACAATAC AGGCCGTCAG GAGGCGGGCC GGAAGTTATC
TTCGCGAGCA GCCCGCATGA TGCGTTTACC AAAGCCTGGG AAAACTCGCA GCCGGGAGAG
GTCATGCTGC TTTCGCCAGG TTGTGCCAGT TACGACTGGT TTGTCAATTT CCGTGATCGA
GGTGAGCAGT TTCGTCAGTT CGTTATAGAG CTGGCAAAGA CTCATGAAGA GCAATGA
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| Protein sequence | MSKNLPQFQK RAFTRRAAIS LAGRHVTVLG LGTLGGAVEA VKFLAAQGAI VTVTDEKPAS
KLAASLAELA QIPIHRFVLG GHDDDDFRKA DLIVANPAVR PDHRLLKLAR DGGIPITTEV
QLFLERCPAP VAAVTGSNGK STTTAMLHRI CEMASGSPGL RRAWLGGNIG VSLLDQLPAI
TSDDLVVMEL SSFQLYWLNQ IEWSPSIAIV TNFSANHLDW HDGLDDYRSA KQTMFRWQNE
SDVAVINLDD PDVCQWPGPA LRLGFQTGSN CSDVTTKYGV FSESEKEGCL PSQILRLPDA
EIRLAASSWL RVKGEHNLQN AMAAIAAASV MDIPMEVIET ALRSYQALPH RLEFVGACAG
REFYNDSLAT TPESAILGLK AFSQPVILLA GGYDKGVDLS SMSKVISKAC RVVVLMGQTA
PAIHEQIEQY RPSGGGPEVI FASSPHDAFT KAWENSQPGE VMLLSPGCAS YDWFVNFRDR
GEQFRQFVIE LAKTHEEQ
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