Gene Plim_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1570 
Symbol 
ID9138270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2023477 
End bp2024118 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629602 
Protein GI296121824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.244985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTGA AGACGGAGCT TTATGCGGAG CAGGCAGAAC AGTGGCCTCA CGAGGGACGT 
CATATTCTGG CACAGTTTGA TCAGGACACG ATCATTGTTT ACCAGGCTTA CCAGCCAGCG 
ATTGGTCATT ACACAGCCAT GCATCGAACT TTTGGTGGTG GTTTCAGTTA TTCCCGAATG 
AGTTGGATCA AGCCGAACTT CTTGTGGATG ATGTATCGCT CAGGTTGGGG AACAAAAGCG 
AATCAGGAGA TCACACTGGC CTTAAGAATC CGCAGGGAGT TTTTTGATGC TCTGCTGGCT 
GAAGCTGTCC CGTCATCCTG GGATCCAACA GAATTTGTCA CTGAAGACGA ATGGTCACAA 
GCGGTGAGCA AGTCTTCAGT GCGCCTGCAG TGGGATCCGG ATCATCATCC CACAGGTGCA 
AAACTCGAAA GAAGGGCCAT TCAGCTCGGG CTGAGAGGGG ATGTCCTCAA AGCTTTTGGA 
CAGCAAGAAC TGATCGACGT TATCGACATT TCAGACTTTG TGAGTGCACA AAGAGAGAGG 
CTCTTAAGTC GAGGCACATC GGCTCTCGTA ACTCCTCTTG AACGCGTGTA CTCACCCGCT 
GATCCTGAGA TAGCACTAAG ACTCAAACTC GCGAAGTGTT GA
 
Protein sequence
MGLKTELYAE QAEQWPHEGR HILAQFDQDT IIVYQAYQPA IGHYTAMHRT FGGGFSYSRM 
SWIKPNFLWM MYRSGWGTKA NQEITLALRI RREFFDALLA EAVPSSWDPT EFVTEDEWSQ 
AVSKSSVRLQ WDPDHHPTGA KLERRAIQLG LRGDVLKAFG QQELIDVIDI SDFVSAQRER 
LLSRGTSALV TPLERVYSPA DPEIALRLKL AKC