Gene Plim_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1562 
Symbol 
ID9138262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2009870 
End bp2010751 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003629594 
Protein GI296121816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATT TCTGGAAATA CGGGCTCGTC ATGCTCTCCC TCTGGGTTGG TCTGCAGCAT 
GCGGCTCTGG CAAGCGATCC CGCTGTGAAA ATTACGCCGG ATGTGGTCTA TGGTCATAAA
GATGGCCTGG CGATGACGCT GGATGTCTTC ACGCCAACCG CAAATGCCAA TGGAGCAGGG
GTGATTTTTA TCGTTAGCGG TGGCTGGTAT TCGCAGTGGA CACCACCCGA AAAGCTGCAT
GGCATGCTCA AGCCACTGAC CGATGCAGGC TATACCGTTT TTGCAGTGCG GCATGGCAGC
AGCCCGAAGT ATGGCATTCC GGATGCCGTC GCCGATGTTC GCCGCAGTGT GCGATTTATT
CGTCTGCATG CCCAACAGTT TGGCATCTCG CCCGACCGAC TGGGAGTCTT TGGCATCAGC
GCTGGAGGAC ATCTTTCACT CACGCTGGGC ACCACAGGAG ACGATGGCCG TGCGAGTGAC
GCTGATCCAG TCAATCGCGT GAGTGATCGT GTTCAGGCCG TGGTGGCCTT TGTTGCTCCT
ACCGATCTGA CGATTATGGT GCGCGAGGCC AAAGACCGGT TGCCGGCTTA CAATCGGTTC
CCGGCGCTGG ATCTCGACCT GGCTGCAGCG AAGAAGCTTT CACCTCTCTT TGAGGTTTCT
GCCGATGACG CGCCGACCTT GCTGCTGGCT GGGGCCAAGG ATGATCTGGT CCCCATCGCG
CACAGCCAGA AAATCAAGGC GGCTTTCGAT CAGACGCAAG TTCCCAGCCG ATTAATGGAA
TTCCCCGAGG CAGGCCATGG CTTGCCTCCT GCCGACATGA AACAGGCCGT TGAAGAAATG
CTGAACTGGT TCAACAAGCA TCTTGCCCCG CCAACTTCAT GA
 
Protein sequence
MADFWKYGLV MLSLWVGLQH AALASDPAVK ITPDVVYGHK DGLAMTLDVF TPTANANGAG 
VIFIVSGGWY SQWTPPEKLH GMLKPLTDAG YTVFAVRHGS SPKYGIPDAV ADVRRSVRFI
RLHAQQFGIS PDRLGVFGIS AGGHLSLTLG TTGDDGRASD ADPVNRVSDR VQAVVAFVAP
TDLTIMVREA KDRLPAYNRF PALDLDLAAA KKLSPLFEVS ADDAPTLLLA GAKDDLVPIA
HSQKIKAAFD QTQVPSRLME FPEAGHGLPP ADMKQAVEEM LNWFNKHLAP PTS