Gene Plim_1556 details

Gene Information

• Locus tag: Plim_1556
• ID: 9138256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2004309
• End bp: 2006342
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 54%
• Product: Redoxin domain protein
• Protein accession: YP_003629588
• Protein GI: 296121810

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.744848
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGAT CGACACCATC TTTTCTGAAG CCGCTGGTGT GCGTCGGGGG ATTACTGGCA 
GGGTCTTTGG CGTTACTCCC GACTTTTGCG GTGGAAAATG TGCCGCAGGC CTCTGCCACA 
GCAGGGAGCC CGCAGGGAAA GTTGGCAGGT CTTTCCGAGC TGACTGATAA AACCTGGAAA 
GATGTGGAAG GAAACGTCTG GACGTTTCCG AAGTCGGAAA CTTCACCTGT TGTTGTGGTG 
GCGTTTCTGG GGACTGAGTG CCCTTTGGCT TTGCAGTATG CGAAGACGTT GAATCTGCTG 
GCAGAACGAT TTGCCAATCG AGGCGTGCAA TTCGTGGGGG TTAACGCCAA TCCTCAAGAT 
TCTCTGGCCG AGATTCAGGC TCAAGCCCGA CGCCAAAAAC TGAGCTACCC GATTCTCAAG 
GATATTCATC AAGACTGGCT CAAGGCGTTA GGGGCTGAGC GAACGCCTCA AGTGGTGGTT 
CTCGATCAAA ACCGCGTCAT TCGCTATAGC GGTCGAATCG ACGACCAGCA CGGGATTGGG 
AAATCGAGGC CAGCTCCGAC TCGCGAAGAT CTGGCTTTGG CTGTCGAACA GATTCTGGCA 
AAGAAAAACG TCGAAATCAG CAAGACCGAA GTCATTGGCT GCCTGATCGG CCGGTTGAGT 
TCACCGAAGG CCCAACCTCA AGTGACATGG GCCAAAGACA TCGCACCGAT CCTCGACCAG 
CACTGTGTCG AGTGCCATCG ACCCGGTGAA ATCGGGCCCT TCAGCCTTGT GAATTACGAG 
GAGACGGCGG GTTGGGCCGA GATGATTGCC GAAGTGACCA GCGAGCGAAG AATGCCTCCC 
TGGCATGCGG AAGAATCGCA TGGCAAATTC CTCAATGAAC GCCGACTCTC TCAAAAGGAA 
ATTGACACAT TGAAGCAATG GGTCGCTGAG GGGACTCCGG CAGGAGACGT TTCACAAAGA 
CCTCCTTTGC CAGTTTTCAC CAATGGTTGG CAATTGCCAC GTCAGCCGGA TCAGGTGGTG 
TGGATGAGCG AGCGGCCGTT CTCTGTCAAA TCGACCGGTG AAGTCAAATA TCAATATTTC 
TCGGCAGATC CCGGGATCAC TGAAGATCGC TGGATTTCGG GTGTTGAGGT GCAACCCGGG 
AACCGGGCTG TGGTCCATCA CGTCATTGTG TTCCTGAGTG AGGATGGCAA AAAGTTTGAT 
CACGATAAGC AGTTTCTGGT GGCGTATGTG CCTGGCTTGA GATTGAAGCC ACTCCCGGAA 
GGCTATGCGA AGCGGATCCC GAAGGGTTCC AAGTTCATTT TTCAGGTGCA TTACACTCCG 
AATGGTGAAG CTCAGGAAGA TCGCACAAAA GTCGGGCTGA TCTTCGCTGA TCCTGCCAAA 
GTGACGCATG AAGTCAAAAC CGAGAGTGTG GCTCAACTTC GTTTTCGGCT AGAGCCCTAC 
AAAGACAATC AGCGCGTTGA CGCCAAGCCG ACAAAAGCTC CCGTCGAGTT GGAATTGCTG 
TCGATGTCAC CTCATATGCA TCTCCGGGGG AAATCCTTCC GTTACGAACT GCAGCCACCC 
GGTGGGGAAC GACAAGTCGT ACTCAATGTT CCCCATTACG ACTTCAACTG GCAGACGCAA 
TATCGTCTGG CAGAACCCAT CAAGGTGGCT CGTGGCTCGA CTCTGTATGC CTCGGCAACA 
TTTGATAATT CGCCAGATAA CCTCGCTAAT CCTGACCCTT CTCAGGTTGT CACCTGGGGG 
GATCAATCCT GGGAAGAGAT GATGATTGGC TACTTCGATA TCGCGATCCC TCGCTCAACC 
GCAGGGAGTG CCAACCTCAT GACTGACTGG CTCGATTCCA AGGAGGGGCC CCGCAAACTC 
CTCAAAGCTC TCGATCGCAA TGGCAGTGGA GAAGTCGACG AGAGCGAGGT TCAGTCGGGC 
CATCGGCAGT TTCTCAAGCA GATCGATGCC GACAACTCTG GTGGATTGAG TGAGGAAGAG 
CTCCGCAGTA ACTGGACGAA AGTGCTCAAG GCGATTTCTG CGAAAAAATC ATAA 

 

Protein sequence

MSGSTPSFLK PLVCVGGLLA GSLALLPTFA VENVPQASAT AGSPQGKLAG LSELTDKTWK 
DVEGNVWTFP KSETSPVVVV AFLGTECPLA LQYAKTLNLL AERFANRGVQ FVGVNANPQD 
SLAEIQAQAR RQKLSYPILK DIHQDWLKAL GAERTPQVVV LDQNRVIRYS GRIDDQHGIG 
KSRPAPTRED LALAVEQILA KKNVEISKTE VIGCLIGRLS SPKAQPQVTW AKDIAPILDQ 
HCVECHRPGE IGPFSLVNYE ETAGWAEMIA EVTSERRMPP WHAEESHGKF LNERRLSQKE 
IDTLKQWVAE GTPAGDVSQR PPLPVFTNGW QLPRQPDQVV WMSERPFSVK STGEVKYQYF 
SADPGITEDR WISGVEVQPG NRAVVHHVIV FLSEDGKKFD HDKQFLVAYV PGLRLKPLPE 
GYAKRIPKGS KFIFQVHYTP NGEAQEDRTK VGLIFADPAK VTHEVKTESV AQLRFRLEPY 
KDNQRVDAKP TKAPVELELL SMSPHMHLRG KSFRYELQPP GGERQVVLNV PHYDFNWQTQ 
YRLAEPIKVA RGSTLYASAT FDNSPDNLAN PDPSQVVTWG DQSWEEMMIG YFDIAIPRST 
AGSANLMTDW LDSKEGPRKL LKALDRNGSG EVDESEVQSG HRQFLKQIDA DNSGGLSEEE 
LRSNWTKVLK AISAKKS