Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1555 |
Symbol | |
ID | 9138255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2002458 |
End bp | 2004095 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | uroporphyrin-III C-methyltransferase |
Protein accession | YP_003629587 |
Protein GI | 296121809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAATC GGATTGGAAA AGTTTATCTG GTCGGTGCCG GGCCGGGTGA TGCGGGATTG TTAACCATTC GTGGCTGGCA ATGTCTACAG GAGGCCCATC TGGTGTTGTA TGACGGCCTC GTCAATCCAC GGATTCTGAA TTGGTCGCGT GGTGAGGCTG TTCGAAGCTG TCGCGCAGGT CGTTCGGCCG GTGGAGATCG CGCCATCAGC ACACATCCGG GCTGGATTTC TCAATCGGAG ATCAACTCCC GGATGATTGA AGCGGCACGC AATGGCCAGA TCGTGGTGCG ATTAAAGGGA GGCGATCCTT TTATCTTTGG GCGCGGCGGT GAAGAAGCTG CTGCTCTGGC TGAAGCGGGG ATTCCGTTTG AAGTGGTTCC GGGGATTACA GCCGCCACTG CTGCAGCCGT CTATTCGGGT TTATCACTGA CGCATCGTGA GTGTGCCTCG GCAGTGGCAT TCATTACGGG GCACGAGGAT CCAGATAAAA CTGAACAGAC ATTGAATTAT CAGTCTCTGG CGAACTTTCC TGGCACGCTC GTCTTCTACA TGGGTTTGCA TCGCCTGGAG ACTATCGCCA GAGCACTTAT TGAAGCCGGC AAGCCGGCAG AGACACCGGC CATGGTTGTG AGTCAGGCGA CCACATCTCG TCAGCAAATG GTGGAAGCGA CTCTGGCGGA TATTGCTGCC AAGGCCAAAC AGGCCAATCT CCTGGCGCCA TCACTCGCCA TGATTGGAAA TGCGATTGAG TGGCGCACCC CTGCTGCCTG GTTTGAAGAG CGGCCACTTC GCCATCTGAG AATTGCGATT CCCAGACCAC TCGAACAGGG AGAATTAACG GCCCTCGAAT GTGAGCAATT GGGAGGTTCT CCGCTGCTGA TGCCCACCAT CTCGATCTCG TCCATCGATG ATTGGACTCT AGTCGATGGA ATCATCGACC GTATCGCAGA GTTCGACTGG ATCATTTTCA CCAGTGTCAA TGGTGTGCGT TGTTTCATGC AGCATTTGTG GCAACGCGGG CTGGATGGTC GCGAGCTGGC GGGTTGCCGA CTGGCTGTGA TTGGTGCGAG CACTGCTGCT GAACTGGAGA AGTGGCATCT TCGTGCCGAC TTTGTGCCCT CTCAGTTTCG CGGTGAAGTC CTTGCGGAAG AACTCGCACA GCAATTCTCT GCAGGACGTG CGATCTGGTT TCGGGCGAAT CGTGGACGAG AAGTTATTCC TGAGCGACTT CAAAAAGCGG GCTGGTCAAT GGAAACGGCT GTGGTGTATC GCAACGAGGA TGTGACCAGT TGGCCGGCAG ATTTCTGGGA AAAACTCTCT CGTAAAGAAG TGGATTGGAT TGCCTTGAGC AGCCCGTCGA TGGCCAGAAA TTGGAAAAAA CTACTTGATG CTTATCTGAG AGAATCTGGC CGCAATGCGT CAGAGTTCAT CAATGCGGCT CGATTTGTAA GCATCAGTCC GGTGACGACA CAAGCCGCCC TCGAAGCGGG GTTATCGATT TCTGCGGAAG CCAGTGTATT CACCTGGGAA GGCATTTTTC GGGCCATTGC GAATGCCGAA GGCAGGCCAT GGCTGAATGT TTCCACCAGC GCGGCCATGC CCACAAAGAG CAGTTTCCCG CCTGGTGAGG AAAGTTAG
|
Protein sequence | MTNRIGKVYL VGAGPGDAGL LTIRGWQCLQ EAHLVLYDGL VNPRILNWSR GEAVRSCRAG RSAGGDRAIS THPGWISQSE INSRMIEAAR NGQIVVRLKG GDPFIFGRGG EEAAALAEAG IPFEVVPGIT AATAAAVYSG LSLTHRECAS AVAFITGHED PDKTEQTLNY QSLANFPGTL VFYMGLHRLE TIARALIEAG KPAETPAMVV SQATTSRQQM VEATLADIAA KAKQANLLAP SLAMIGNAIE WRTPAAWFEE RPLRHLRIAI PRPLEQGELT ALECEQLGGS PLLMPTISIS SIDDWTLVDG IIDRIAEFDW IIFTSVNGVR CFMQHLWQRG LDGRELAGCR LAVIGASTAA ELEKWHLRAD FVPSQFRGEV LAEELAQQFS AGRAIWFRAN RGREVIPERL QKAGWSMETA VVYRNEDVTS WPADFWEKLS RKEVDWIALS SPSMARNWKK LLDAYLRESG RNASEFINAA RFVSISPVTT QAALEAGLSI SAEASVFTWE GIFRAIANAE GRPWLNVSTS AAMPTKSSFP PGEES
|
| |