| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1507 |
|---|
| Symbol | |
|---|
| ID | 9138204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1945656 |
|---|
| End bp | 1946864 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_003629539 |
|---|
| Protein GI | 296121761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTT TATCAGCCTA CATTGAGCGA TCATCGACAA TTGACCTGCT CATGCGATTA
CTGGAAGTCC CTGGCCTGAG TGGTCAGGAA ACAGCGATTT CTCAAGCCGT CCAGGCAGAA
CTGATTGCGG CTGGAGTACC CGCCACGAGC ATGTTCAACG ACGATGCTCA CAGCCGAATT
GATCTGCCTT GTGAAATTGG CAATCTGTTT GTCCATCTTC CAGGCACAAA GCCCGGCCCG
CGAATCATGT TTTCCACGCA CCTGGATACC GTTCCCATTT GCCAGGGTGC GAAACCAATT
CTTAAAGAGG GCCAGATTTG TACTGATGGA TCAACAGGTC TCGGAGGCGA CAACCGAACT
GGCTGCGCGG TTCTGATCTC GACTGTAGCC GCTCTATTAA AGCATCGGCT TCCTCACCCG
CCGATCACTC TGCTGTTTAC GATCCGTGAA GAAAGCGGCA TTCAAGGTGC CCGCTACCTC
GATACAAAAG CGGTGTCCGA TGTCCAGATG TGTTTCAATT TTGATGGAAA AGTACCGGCT
GAATTGGTCA CTGGAGCCGT CGGCCAGGAA ACCTTCTATG TCGAGATCAC TGGCCTGGCT
TCACACGCTG GAGTTGCACC GGAACAGGGC ATTTCGGCCA CATTGATTGC TTCGAAAGCC
ATTGCCGATG TGCATGCTCA AGGATGGTTT GGGAAAATCC AGAAGTCTGA CGGCTATGGA
ACCAGTAACA TTGGGATTTT TGGTGGCAAA AAAGGGCTGG CCGCCGGTGA TGCCACGAAT
GTCGTTACGG ACTATGTCTA TTTAAAAGGC GAAGCGCGGA GTCATGACGC GGAATTCAAT
TCCCGGATCA CTGCGGCTTA TCAGGCGGCG TTTGAAAAGG CAGTGAATGA AGTTTCGACG
ATCGATGGTC AGAGAGCGAC ACTCAAGTTT ACAATCCACA AAGCGTATCC TCCGTTTCAT
CTGGAAGATC ACAGCCCGGT CGTTGTGCGT GCCATCGAAG CTGCCAAATC GATTGGTATG
TCGCCGATCA CAAAGTCCTC GAATGGTGGT CTGGATGCCA ACTGGCTGGT GAAACATGGC
GTGCCCACGG TCACCATGGG TGCCGGTCAG CATGAGATTC ACACCATCAA GGAGTTTATC
AATCTTGACG AATTCATGGA TGGGTGTCTG CTTGCGTTGG CCATTGCCAC GCAGTGCAGT
CAAGAATGA
|
|---|
| Protein sequence | MASLSAYIER SSTIDLLMRL LEVPGLSGQE TAISQAVQAE LIAAGVPATS MFNDDAHSRI
DLPCEIGNLF VHLPGTKPGP RIMFSTHLDT VPICQGAKPI LKEGQICTDG STGLGGDNRT
GCAVLISTVA ALLKHRLPHP PITLLFTIRE ESGIQGARYL DTKAVSDVQM CFNFDGKVPA
ELVTGAVGQE TFYVEITGLA SHAGVAPEQG ISATLIASKA IADVHAQGWF GKIQKSDGYG
TSNIGIFGGK KGLAAGDATN VVTDYVYLKG EARSHDAEFN SRITAAYQAA FEKAVNEVST
IDGQRATLKF TIHKAYPPFH LEDHSPVVVR AIEAAKSIGM SPITKSSNGG LDANWLVKHG
VPTVTMGAGQ HEIHTIKEFI NLDEFMDGCL LALAIATQCS QE
|
|---|
| |