Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1494 |
Symbol | |
ID | 9138191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1925880 |
End bp | 1926794 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transglutaminase domain protein |
Protein accession | YP_003629526 |
Protein GI | 296121748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0531401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACC GCATTACCCA CACGACCGAC TACCGCTACA CCGACCCGGT GGCTGTCTGC CATAATGTGG TGCATCTGGC ACCACGAAAC ATGCTGACTC AACGGTGTTT CGATCATCGG GTCATCGTCA GGCCAAAGCC TGCTGCCATT GTTCGACGGA CTGATTTTTT TGGGAACGTC GAGCATTACT TTGCCATACA GCGACCTCAT CGACGTTTGA TTGTAAAATC GATCAGCCAT ATTGAAGTGA TCGTTAAGCC CCCCGTGATC CCAAGTCTGT CACCCTCCTG GGAACAAATG GTGCAACGAT TGTGCCGCGC TGACGGGCAC GACTGCCTTG ATGCCATGCA GTTTTGCATC GACTCGCCAT CGATTCACTC ATTTCCAGCC CTTCGAGAGT ACGCTGCTCT CTCTTTCAGC CCGGGAAAGC CCATTGTTTC AGCAGTTCTT GATCTCACGG CACGAATTTT TCATGATTTC AAATACGATC CGACAGCCAC AACAGTGAAC AGCCCTCTGG AAGAAGTTCT GGAGAGCCGA CGCGGGGTCT GTCAGGATTT TGCACATTTG CAGATTGGTT GCCTGCGCTC GTTAGGTCTG GCTGCCCGTT ATGTCAGTGG ATACATCCGG ACGTTACCAC CTCCGGGGAA GCCCAGGCTG ATTGGTGCTG ATGCTTCTCA TGCATGGTTA TCGGTCTTTT GCGGTGAGAT GGGATGGATT GATTTTGACC CGACAAATAA CACGATGGCT TCCGACCAAC ATATCACCAC GGCATGGGGC AGAGATTACA CCGATGTCTG CCCCATCAAA GGCGTATTTA TCGGTGGGGG TCAGCATACG ATGGCAATTT CTGTGGATGT TATGCCCGAA GAAGAATTCG ACACCGCGAG CGGTTATGCC GCTACCGCCG GGTAA
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Protein sequence | MEYRITHTTD YRYTDPVAVC HNVVHLAPRN MLTQRCFDHR VIVRPKPAAI VRRTDFFGNV EHYFAIQRPH RRLIVKSISH IEVIVKPPVI PSLSPSWEQM VQRLCRADGH DCLDAMQFCI DSPSIHSFPA LREYAALSFS PGKPIVSAVL DLTARIFHDF KYDPTATTVN SPLEEVLESR RGVCQDFAHL QIGCLRSLGL AARYVSGYIR TLPPPGKPRL IGADASHAWL SVFCGEMGWI DFDPTNNTMA SDQHITTAWG RDYTDVCPIK GVFIGGGQHT MAISVDVMPE EEFDTASGYA ATAG
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