Gene Plim_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1488 
Symbol 
ID9138185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1917341 
End bp1918360 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content53% 
IMG OID 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_003629520 
Protein GI296121742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.183597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTTG AGAGCACGTC TGCCGGCACA AAGCTCATTG AAGAAAGTTT TGACTCGGAA 
CTGGCACGCC GTCATCGGTA TGGCATGATC TTCGAATGGG TCTGCTGGTT GGCCACGTGG
GGATCAGTCG TCATCCTCGG CGTGCTGATT GCGACGATGG CCTGGCAGGC CATGGGATGG
CTGACACCAA AGTTTCTCGT TTCGATGCCC CGTAGAAATC CGGCTGATGC AGGGATTCTA
CCGGGTATTG TCGGGACATT CTGGCTGATC CTGCTCACGG CAATTTTATC AGTCCCCCTG
GGGGTTGGTG CTGCAATTTA CCTCGAAGAA TACTCTAAGC CGACACTGCT GACGAAATTC
ATTCAGCTGA ATATCGCGAA TCTGGCCGGT GTTCCTTCGA TAGTTTATGG CATTCTTGGA
TTCACCGCCT TTGTGCGAAT GTTCGGCCTC GCGAAAAGTG AGTACCTCAT TAATCTGGGG
ATAGGAAGCC TGCAGCTGAC ACTCCCTTTC GGTCGCACAG TGATCTCGGG TGCATTGACA
CTGGCGCTCT TGAGCCTGCC AGTCGTGATC ATTGCCAGCC AGGAAGCACT GCGATCCGTT
CCACCGAGCC TGCGTCATGC TTCATTAGCT CTGGGAGCCA CAAAGTGGCA AACCATCTGG
CATCAGGTTC TGCCCTCAGC TCTTCCGGGA ATGATGACCG GAGTGATTCT CGCCATGTCT
CGAGCCATTG GTGAAACAGC ACCGCTTGTG GCTATCGGTG CGGCAACCTA CATCACCTTC
ACACCTGGGC GTCTCAATTC CGTCTCTGAA GCAATCACCA GGCCAGACAA GCTGGCTCAA
GTTCCCTTTG ATTCGTTTAC CACAATTCCG ATGCAGATCT ATGGCTGGAT CAACGAAGCA
AAACCTGAAT TCCAGCATGT TGCGGCGGCA GCCATTCTTG TGCTGCTTGT CATCCTGCTG
ATCTCCAATG GTCTGGCAAT CTTTATTCGC CAGCACTTCC AGAAGAAAGT TCGCTGGTAG
 
Protein sequence
MPLESTSAGT KLIEESFDSE LARRHRYGMI FEWVCWLATW GSVVILGVLI ATMAWQAMGW 
LTPKFLVSMP RRNPADAGIL PGIVGTFWLI LLTAILSVPL GVGAAIYLEE YSKPTLLTKF
IQLNIANLAG VPSIVYGILG FTAFVRMFGL AKSEYLINLG IGSLQLTLPF GRTVISGALT
LALLSLPVVI IASQEALRSV PPSLRHASLA LGATKWQTIW HQVLPSALPG MMTGVILAMS
RAIGETAPLV AIGAATYITF TPGRLNSVSE AITRPDKLAQ VPFDSFTTIP MQIYGWINEA
KPEFQHVAAA AILVLLVILL ISNGLAIFIR QHFQKKVRW