Gene Plim_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1486 
Symbol 
ID9138183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1915702 
End bp1916376 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content53% 
IMG OID 
Productphosphate transport system regulatory protein PhoU 
Protein accessionYP_003629518 
Protein GI296121740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.130643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTC ACCTCATTCG CGACCTTGAT GCTCTGCATC GAAACGTGCT CACGATGTGT 
GCCCGCGTTG AGGAACTGAT TGATTCAGCC GTCGATGCCC TGCACCGCCG GGATTACGAG 
AAGGCCGAGG AGATCCCGGC TCAAGATGAC GAAATCGATC GCATGGACGT GCAGATCGAG 
GAGGAATGTC TCAAACTCCT CGCACTGCAT CAGCCAGTGG CCGTCGACCT GCGACGAATT 
ACGACCGTGA TGAAGATCTC TGGTGAGCTC GAGCGAGTCG CTGATCTGGG GGTGAATATC 
TCTGAGCGTG CGCTTTCTAT TATCCGTTGT GGTGAAGTCC ACGTACCGGA CGATTTTCGC 
GAGATGTCAC ATCTGGCACT GAGCATGCTG CATCGCAGTA TCGACTCGTA TGTGGACATG 
GATGTCAAGC TGGCCCGCGA TGTCTGCCAG ACAGATGATC GCGTTGACAA CCTCAATAGA 
GAGATTATTC ACGATCTCAT TCTGCGGATG CAGCGGCAGC CACAACTTAT TGAATTGCAC 
ATGCACCTTT TCAGTGTGTG CCGACAGATC GAGCGAGTTG CTGATCACGC GACAAATATT 
GCCGAAGATG TGGTTTATCT TGTCGAAGGT GAGATCATCC GACATCGCAA CCGCTTGGAG 
ACAGGCCCTG CGTAA
 
Protein sequence
MAIHLIRDLD ALHRNVLTMC ARVEELIDSA VDALHRRDYE KAEEIPAQDD EIDRMDVQIE 
EECLKLLALH QPVAVDLRRI TTVMKISGEL ERVADLGVNI SERALSIIRC GEVHVPDDFR 
EMSHLALSML HRSIDSYVDM DVKLARDVCQ TDDRVDNLNR EIIHDLILRM QRQPQLIELH 
MHLFSVCRQI ERVADHATNI AEDVVYLVEG EIIRHRNRLE TGPA