Gene Plim_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1439 
Symbol 
ID9138134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1848258 
End bp1849787 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629472 
Protein GI296121694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.421301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACT TTCAAAGTAG TTCCTCGATG ATTATCGTCG CTTTGTTGAC GATCGGATTT 
TCATATGTTC ACTCAGTTTC TGCAGAGGAA GTTGGTGAAC GCTGGGGCAC GGAAGAGCGA
GAGCGGGCCT ATTATCCCAT TGTCAATATT CCACTCCCCA AAGAGACCGT TATCGAAGCC
GGGGCCTTTG CGACACTACC TGATGGTCGT GTCGCCGTTG GAACACGCCA TGGCGAGATC
TATATCATTG ACGGTATTGA CGATGAAAAG CCGAATCCAA GGTTTCACCG TTTCGCCTCG
GGGTTGGATG AAATTTTCGG GCTCTCTTGG AAAGACCAGT CTCTTCTCGT CACCCAAAGC
TGCGAACTGA CTCGTGTGAG TGATTCCGAT GGCGATAGAA TCGCTGATCG TTTTGAGACG
ATTTCTGATG CCTGGGGCTA TGCGAATTAT CACGAGTATG CATTTGGTTC GAAGCCGGAT
TCCGCGGGAA ATCTGTTTAT CGCTCTTGGA CTTTCGGAGT CTTACCACTC TTATGCACTC
AATCGCGGTT TCATTATGAA GGTGGCTCCT GATGGAGCGA CGACAGCTTT CGCCAGCGGT
TTGCGAAGTC CCGGCGGAAT TGGTCATGAT GAGCATGGGG CATTGTTTTA TATTGAAAGT
CAGGGTCCCT GGAACTGCTC ATGCAGCTTG AAGGCGGTTA CCAAGGGGAG CTTTCACGGG
CATCCGGCGA GTTTTCCGTG GTATAAGACG GCTCCAGAAC TGGGCCCTGT CCCAGTGATG
CCTACTTCTG GTACAAGAGT CGTTACTGAA CGTCAACGCG TAGCACAACT TGCCCCCTAC
GCCGTGATTT TTCCGTATAT TCGCATGGGC CGGTCGATTA CCGCTTTCAC GGTCAATCAG
ACTCGAGGAA AATTCGGCCC ATTTGAAAAC CAGTTATTTC TCGGTGACTA CACACAATCA
ATCGTCATGC GGGCCACGAC GGAACAGGTC AAAGGAGTAT GGCAAGGAGC CTGCTATCCC
TTCCGGGAAG GCTTATCGAC GGGGATTCTC AGCGTCGAAT TTACGCCTCA AGGCAAGCTG
TTAACTGGTG GTACCAATCG CGGCTGGCCT GTTCGAGGTA TCAAACCTTT CGCTTTGGAG
CGAATTGAGT GGAATGGGAA AATGCCATTC GAAATTGAAC GGGTGACGAT CGAGCCTGAA
GGGTTCAAAC TGACGTTTAC AAAACCTCTT AGTCAAGAAG TCGGACAACT GCCAGAATCT
TATAAAGTCT TCGGTTTCAC GCATCCTTAC CATGCTGGCT ATGGAGGACC GGAAATCGAA
AAACATCAGC CAATGATGCA ATCAGTTGAA ATTTCCCCAG ACGGCAGTTC TGCGAAAATA
AAAATTGATC GACTTCAACC TGGATTTGTG TATGAGTTAG ATTGTTCAAG GCTACGTTCA
ATCGATGACG AATCTCTTCT TCATCACCAT GCCTTTTATA CAGTGAATGA AATCCCCGAT
AAGGTCGGTG ATGTTGTGAA TGGGAAATAG
 
Protein sequence
MNYFQSSSSM IIVALLTIGF SYVHSVSAEE VGERWGTEER ERAYYPIVNI PLPKETVIEA 
GAFATLPDGR VAVGTRHGEI YIIDGIDDEK PNPRFHRFAS GLDEIFGLSW KDQSLLVTQS
CELTRVSDSD GDRIADRFET ISDAWGYANY HEYAFGSKPD SAGNLFIALG LSESYHSYAL
NRGFIMKVAP DGATTAFASG LRSPGGIGHD EHGALFYIES QGPWNCSCSL KAVTKGSFHG
HPASFPWYKT APELGPVPVM PTSGTRVVTE RQRVAQLAPY AVIFPYIRMG RSITAFTVNQ
TRGKFGPFEN QLFLGDYTQS IVMRATTEQV KGVWQGACYP FREGLSTGIL SVEFTPQGKL
LTGGTNRGWP VRGIKPFALE RIEWNGKMPF EIERVTIEPE GFKLTFTKPL SQEVGQLPES
YKVFGFTHPY HAGYGGPEIE KHQPMMQSVE ISPDGSSAKI KIDRLQPGFV YELDCSRLRS
IDDESLLHHH AFYTVNEIPD KVGDVVNGK