Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1439 |
Symbol | |
ID | 9138134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1848258 |
End bp | 1849787 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003629472 |
Protein GI | 296121694 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.421301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTACT TTCAAAGTAG TTCCTCGATG ATTATCGTCG CTTTGTTGAC GATCGGATTT TCATATGTTC ACTCAGTTTC TGCAGAGGAA GTTGGTGAAC GCTGGGGCAC GGAAGAGCGA GAGCGGGCCT ATTATCCCAT TGTCAATATT CCACTCCCCA AAGAGACCGT TATCGAAGCC GGGGCCTTTG CGACACTACC TGATGGTCGT GTCGCCGTTG GAACACGCCA TGGCGAGATC TATATCATTG ACGGTATTGA CGATGAAAAG CCGAATCCAA GGTTTCACCG TTTCGCCTCG GGGTTGGATG AAATTTTCGG GCTCTCTTGG AAAGACCAGT CTCTTCTCGT CACCCAAAGC TGCGAACTGA CTCGTGTGAG TGATTCCGAT GGCGATAGAA TCGCTGATCG TTTTGAGACG ATTTCTGATG CCTGGGGCTA TGCGAATTAT CACGAGTATG CATTTGGTTC GAAGCCGGAT TCCGCGGGAA ATCTGTTTAT CGCTCTTGGA CTTTCGGAGT CTTACCACTC TTATGCACTC AATCGCGGTT TCATTATGAA GGTGGCTCCT GATGGAGCGA CGACAGCTTT CGCCAGCGGT TTGCGAAGTC CCGGCGGAAT TGGTCATGAT GAGCATGGGG CATTGTTTTA TATTGAAAGT CAGGGTCCCT GGAACTGCTC ATGCAGCTTG AAGGCGGTTA CCAAGGGGAG CTTTCACGGG CATCCGGCGA GTTTTCCGTG GTATAAGACG GCTCCAGAAC TGGGCCCTGT CCCAGTGATG CCTACTTCTG GTACAAGAGT CGTTACTGAA CGTCAACGCG TAGCACAACT TGCCCCCTAC GCCGTGATTT TTCCGTATAT TCGCATGGGC CGGTCGATTA CCGCTTTCAC GGTCAATCAG ACTCGAGGAA AATTCGGCCC ATTTGAAAAC CAGTTATTTC TCGGTGACTA CACACAATCA ATCGTCATGC GGGCCACGAC GGAACAGGTC AAAGGAGTAT GGCAAGGAGC CTGCTATCCC TTCCGGGAAG GCTTATCGAC GGGGATTCTC AGCGTCGAAT TTACGCCTCA AGGCAAGCTG TTAACTGGTG GTACCAATCG CGGCTGGCCT GTTCGAGGTA TCAAACCTTT CGCTTTGGAG CGAATTGAGT GGAATGGGAA AATGCCATTC GAAATTGAAC GGGTGACGAT CGAGCCTGAA GGGTTCAAAC TGACGTTTAC AAAACCTCTT AGTCAAGAAG TCGGACAACT GCCAGAATCT TATAAAGTCT TCGGTTTCAC GCATCCTTAC CATGCTGGCT ATGGAGGACC GGAAATCGAA AAACATCAGC CAATGATGCA ATCAGTTGAA ATTTCCCCAG ACGGCAGTTC TGCGAAAATA AAAATTGATC GACTTCAACC TGGATTTGTG TATGAGTTAG ATTGTTCAAG GCTACGTTCA ATCGATGACG AATCTCTTCT TCATCACCAT GCCTTTTATA CAGTGAATGA AATCCCCGAT AAGGTCGGTG ATGTTGTGAA TGGGAAATAG
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Protein sequence | MNYFQSSSSM IIVALLTIGF SYVHSVSAEE VGERWGTEER ERAYYPIVNI PLPKETVIEA GAFATLPDGR VAVGTRHGEI YIIDGIDDEK PNPRFHRFAS GLDEIFGLSW KDQSLLVTQS CELTRVSDSD GDRIADRFET ISDAWGYANY HEYAFGSKPD SAGNLFIALG LSESYHSYAL NRGFIMKVAP DGATTAFASG LRSPGGIGHD EHGALFYIES QGPWNCSCSL KAVTKGSFHG HPASFPWYKT APELGPVPVM PTSGTRVVTE RQRVAQLAPY AVIFPYIRMG RSITAFTVNQ TRGKFGPFEN QLFLGDYTQS IVMRATTEQV KGVWQGACYP FREGLSTGIL SVEFTPQGKL LTGGTNRGWP VRGIKPFALE RIEWNGKMPF EIERVTIEPE GFKLTFTKPL SQEVGQLPES YKVFGFTHPY HAGYGGPEIE KHQPMMQSVE ISPDGSSAKI KIDRLQPGFV YELDCSRLRS IDDESLLHHH AFYTVNEIPD KVGDVVNGK
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