Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1438 |
Symbol | |
ID | 9138133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1845791 |
End bp | 1848277 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003629471 |
Protein GI | 296121693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.45862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCAAT TCGAGGTGAT CGGATCAAAG AATGGCACTC AATTGTTAAA GACCCATCAG CAGGTATCAT GGCGCTTCAT TTTTGTAAAT CTCATCGTGT TATGGGCTAT GCAATGGGGT GCTGCTAAGC CTGCCTTATC GGCCGAAACC GAGAGTGCAG CCTGGCCTGG CCTGCATCCA CTTACTGCAG CACAAGTGGG TAGTCTGCTG ATTCATGAGT TGAAGTGCGG AGCCTGTCAT ACTGGGGTTG AGAGCGGAAG GATCTCCGAA AAGACCGCTC CCGATTTGAC GAACGTGGGG GGGCGAGTCT CCCCAAAGTA TCTCCAGGAG TTCATCGCAC ATCCCGCTCA AAAGCATCCC GGGACAACGA TGCCTGATCT CCTGGCATCG CGACCTGAAA CTGATCGCAC AGCGATCGCA GAGGCTATTA CCCAATTTCT GGTGGATCAA TCCAAAGAAA AGTCTCTGCC AGCAGCAGGC AGCCAGTTCG ATCAACTGCG TGGAAAAACT CTCTATCACT CCATAGGTTG TGTTGCCTGT CATGGCCCTC GGGAGGTCTT CGAGCAAGTC TCTGAGAAAC CGAAGGAAAC GGATGACGAT TTCGATGATG AGCCCGAAGA TCATCGTGAA AAGCGAGTCC AGCCAGTCGC TTTCGGTCTT GATCATGTCC GAGAGAAATA CAACGTCGCT TCGCTGAGTC AATTCCTGTT TGCACCGCTG CATGTTCGTC AGTCAGGGCG CATGCCTGAT ATGAAACTGA AACCCGACGA AGCTTTGTCG ATAGCGGCCT ATCTGGTCGG AGATAGTAAG GTCGACGAAT CGTTAAAAAC CGACGAACGT CTGGTGCACC GTGGACGACA ATATTTTCAA GAGCTGAATT GTGCGGCTTG TCACTCTCTC CCTGGTATCA CTGCAGCCAA GCGAGTGAAT CGTCTATCAG AAACCAGCCT TTCCCGTGGT TGTTTGACGG GCAAGGGCGG GAAATCTCCA CGATATGCTG TGAGTCGGGA GCAGCGTCTT GCCATGGAGT TGTTCATCAA GGAGTCTACA AAAAGCGATT CTCCTCCTGT CATTGATACG GATCAGGTCG CCATTGCAAA GACACTTGCG ACATTTCACT GCATTGCGTG CCATACCCGC GATGATTTCG GAGGGGTACC TGATATCTAC AATATGTTTT TCACGGGGAA CGACTTGAAG CTGGGGGACG ATGGGCGGAT TCCACCGCCA CTCACTCATG TGGGTGCAAA GTTACGGCCT GCCTGGCTCA AAAAAGTCCT TTTCGATGGT GAGAGTGTGC GTCCTTATAT GGTGACCCGC ATGCCTCAGT ATGGAGAGCT GAATATCGGC CATTTGCCCG AGATGTTTGC CAGTGTGGAT CATCTTCAAG GGAAAGACCT CACGATTCCT GATGTCGAGG GAGCTAAGCC ACAGGACCGA GAACGGGAGA AACTTTTGCG ACAGGCTGGT CGGGAGTTGT TAGGAGATAA AGGTCTCAAC TGTATTGCCT GCCACAGCTT TAATGGACGA TCTTCTCAGG GAAGCCAGGG AATTGATCTG CTCACAAGTT ATCAGCGGCT CCAGCCACAG TATTTTGATA GCTATTTAAG AAATCCAGGC TCCTTTCGTC CTCGAACCGT CATGCCTACG GCGTGGCCGA ATGGAGTTGC GACGTTTACC ACCATTCTTG ACGGAGAGAC AGACCACCAG ATTGAAGCGA TCTGGTACTA TTTGTCACTG GGAACCTCTG CCGCGGACCC ATCAGGTTTG CGAAGTGTTA ACACAAAGTT GGTTGTGGAT GGTTCAAAGG CCCAGATTCA TCGTGGCAGG AGTCGTATCG CCGGTTATCG CGGCATTGCT GTCGGCTTGC CAGAAAGGTG GAACTACGCA TTCAATGCAG AAACAGGGAC GATTTCCGGA ATCTGGAAAG GGGACTATAT TCAGGTGAAC TGGAGTGGCC AGGGATCGGG TGATTTTCAA CCTGCGACTG AAGCCGTCAC CCTCCCGCAG GATGTCTCTT TTCTGCAATT CGAAGGCGAA CCAACTGTCT GGCCCAGAAT GCCTGTCATG ACGAAAGAGG CTCGCACAAA CCCTGATCCA CTCTATCCGA AGAACGTCGG TTATCAATTT CGAGGCTATA CTTTAGATGA AGATCACATT CCTACATTCT CATATCGATC TGGTGCCGTT GATATCTTTG ATCGCACACA GATACTGGGA GATCCTGGTA ACGAACGCTT GCAGCGGATC TTCCGGTTTG AATCGCCGAC GACTCAAACG TTGTGGTTTC GCGGGTTGGC AGGGAAAATC ACCAAGGAGG ATTCGCAAAC CTTTCGTTTG GGAAACCTTC GATTGTCTAT TCCTGAGATC CCATTCCGAC TGCGAGAAAT ACCAGATCAA GCCGGCGAAG TCGAACTCCT GATACCACTT CAAATTTCTC AAGGCCAATC GACTTTGGAG GTGAATTATG AATTACTTTC AAAGTAG
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Protein sequence | MGQFEVIGSK NGTQLLKTHQ QVSWRFIFVN LIVLWAMQWG AAKPALSAET ESAAWPGLHP LTAAQVGSLL IHELKCGACH TGVESGRISE KTAPDLTNVG GRVSPKYLQE FIAHPAQKHP GTTMPDLLAS RPETDRTAIA EAITQFLVDQ SKEKSLPAAG SQFDQLRGKT LYHSIGCVAC HGPREVFEQV SEKPKETDDD FDDEPEDHRE KRVQPVAFGL DHVREKYNVA SLSQFLFAPL HVRQSGRMPD MKLKPDEALS IAAYLVGDSK VDESLKTDER LVHRGRQYFQ ELNCAACHSL PGITAAKRVN RLSETSLSRG CLTGKGGKSP RYAVSREQRL AMELFIKEST KSDSPPVIDT DQVAIAKTLA TFHCIACHTR DDFGGVPDIY NMFFTGNDLK LGDDGRIPPP LTHVGAKLRP AWLKKVLFDG ESVRPYMVTR MPQYGELNIG HLPEMFASVD HLQGKDLTIP DVEGAKPQDR EREKLLRQAG RELLGDKGLN CIACHSFNGR SSQGSQGIDL LTSYQRLQPQ YFDSYLRNPG SFRPRTVMPT AWPNGVATFT TILDGETDHQ IEAIWYYLSL GTSAADPSGL RSVNTKLVVD GSKAQIHRGR SRIAGYRGIA VGLPERWNYA FNAETGTISG IWKGDYIQVN WSGQGSGDFQ PATEAVTLPQ DVSFLQFEGE PTVWPRMPVM TKEARTNPDP LYPKNVGYQF RGYTLDEDHI PTFSYRSGAV DIFDRTQILG DPGNERLQRI FRFESPTTQT LWFRGLAGKI TKEDSQTFRL GNLRLSIPEI PFRLREIPDQ AGEVELLIPL QISQGQSTLE VNYELLSK
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