Gene Plim_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1438 
Symbol 
ID9138133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1845791 
End bp1848277 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629471 
Protein GI296121693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.45862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCAAT TCGAGGTGAT CGGATCAAAG AATGGCACTC AATTGTTAAA GACCCATCAG 
CAGGTATCAT GGCGCTTCAT TTTTGTAAAT CTCATCGTGT TATGGGCTAT GCAATGGGGT
GCTGCTAAGC CTGCCTTATC GGCCGAAACC GAGAGTGCAG CCTGGCCTGG CCTGCATCCA
CTTACTGCAG CACAAGTGGG TAGTCTGCTG ATTCATGAGT TGAAGTGCGG AGCCTGTCAT
ACTGGGGTTG AGAGCGGAAG GATCTCCGAA AAGACCGCTC CCGATTTGAC GAACGTGGGG
GGGCGAGTCT CCCCAAAGTA TCTCCAGGAG TTCATCGCAC ATCCCGCTCA AAAGCATCCC
GGGACAACGA TGCCTGATCT CCTGGCATCG CGACCTGAAA CTGATCGCAC AGCGATCGCA
GAGGCTATTA CCCAATTTCT GGTGGATCAA TCCAAAGAAA AGTCTCTGCC AGCAGCAGGC
AGCCAGTTCG ATCAACTGCG TGGAAAAACT CTCTATCACT CCATAGGTTG TGTTGCCTGT
CATGGCCCTC GGGAGGTCTT CGAGCAAGTC TCTGAGAAAC CGAAGGAAAC GGATGACGAT
TTCGATGATG AGCCCGAAGA TCATCGTGAA AAGCGAGTCC AGCCAGTCGC TTTCGGTCTT
GATCATGTCC GAGAGAAATA CAACGTCGCT TCGCTGAGTC AATTCCTGTT TGCACCGCTG
CATGTTCGTC AGTCAGGGCG CATGCCTGAT ATGAAACTGA AACCCGACGA AGCTTTGTCG
ATAGCGGCCT ATCTGGTCGG AGATAGTAAG GTCGACGAAT CGTTAAAAAC CGACGAACGT
CTGGTGCACC GTGGACGACA ATATTTTCAA GAGCTGAATT GTGCGGCTTG TCACTCTCTC
CCTGGTATCA CTGCAGCCAA GCGAGTGAAT CGTCTATCAG AAACCAGCCT TTCCCGTGGT
TGTTTGACGG GCAAGGGCGG GAAATCTCCA CGATATGCTG TGAGTCGGGA GCAGCGTCTT
GCCATGGAGT TGTTCATCAA GGAGTCTACA AAAAGCGATT CTCCTCCTGT CATTGATACG
GATCAGGTCG CCATTGCAAA GACACTTGCG ACATTTCACT GCATTGCGTG CCATACCCGC
GATGATTTCG GAGGGGTACC TGATATCTAC AATATGTTTT TCACGGGGAA CGACTTGAAG
CTGGGGGACG ATGGGCGGAT TCCACCGCCA CTCACTCATG TGGGTGCAAA GTTACGGCCT
GCCTGGCTCA AAAAAGTCCT TTTCGATGGT GAGAGTGTGC GTCCTTATAT GGTGACCCGC
ATGCCTCAGT ATGGAGAGCT GAATATCGGC CATTTGCCCG AGATGTTTGC CAGTGTGGAT
CATCTTCAAG GGAAAGACCT CACGATTCCT GATGTCGAGG GAGCTAAGCC ACAGGACCGA
GAACGGGAGA AACTTTTGCG ACAGGCTGGT CGGGAGTTGT TAGGAGATAA AGGTCTCAAC
TGTATTGCCT GCCACAGCTT TAATGGACGA TCTTCTCAGG GAAGCCAGGG AATTGATCTG
CTCACAAGTT ATCAGCGGCT CCAGCCACAG TATTTTGATA GCTATTTAAG AAATCCAGGC
TCCTTTCGTC CTCGAACCGT CATGCCTACG GCGTGGCCGA ATGGAGTTGC GACGTTTACC
ACCATTCTTG ACGGAGAGAC AGACCACCAG ATTGAAGCGA TCTGGTACTA TTTGTCACTG
GGAACCTCTG CCGCGGACCC ATCAGGTTTG CGAAGTGTTA ACACAAAGTT GGTTGTGGAT
GGTTCAAAGG CCCAGATTCA TCGTGGCAGG AGTCGTATCG CCGGTTATCG CGGCATTGCT
GTCGGCTTGC CAGAAAGGTG GAACTACGCA TTCAATGCAG AAACAGGGAC GATTTCCGGA
ATCTGGAAAG GGGACTATAT TCAGGTGAAC TGGAGTGGCC AGGGATCGGG TGATTTTCAA
CCTGCGACTG AAGCCGTCAC CCTCCCGCAG GATGTCTCTT TTCTGCAATT CGAAGGCGAA
CCAACTGTCT GGCCCAGAAT GCCTGTCATG ACGAAAGAGG CTCGCACAAA CCCTGATCCA
CTCTATCCGA AGAACGTCGG TTATCAATTT CGAGGCTATA CTTTAGATGA AGATCACATT
CCTACATTCT CATATCGATC TGGTGCCGTT GATATCTTTG ATCGCACACA GATACTGGGA
GATCCTGGTA ACGAACGCTT GCAGCGGATC TTCCGGTTTG AATCGCCGAC GACTCAAACG
TTGTGGTTTC GCGGGTTGGC AGGGAAAATC ACCAAGGAGG ATTCGCAAAC CTTTCGTTTG
GGAAACCTTC GATTGTCTAT TCCTGAGATC CCATTCCGAC TGCGAGAAAT ACCAGATCAA
GCCGGCGAAG TCGAACTCCT GATACCACTT CAAATTTCTC AAGGCCAATC GACTTTGGAG
GTGAATTATG AATTACTTTC AAAGTAG
 
Protein sequence
MGQFEVIGSK NGTQLLKTHQ QVSWRFIFVN LIVLWAMQWG AAKPALSAET ESAAWPGLHP 
LTAAQVGSLL IHELKCGACH TGVESGRISE KTAPDLTNVG GRVSPKYLQE FIAHPAQKHP
GTTMPDLLAS RPETDRTAIA EAITQFLVDQ SKEKSLPAAG SQFDQLRGKT LYHSIGCVAC
HGPREVFEQV SEKPKETDDD FDDEPEDHRE KRVQPVAFGL DHVREKYNVA SLSQFLFAPL
HVRQSGRMPD MKLKPDEALS IAAYLVGDSK VDESLKTDER LVHRGRQYFQ ELNCAACHSL
PGITAAKRVN RLSETSLSRG CLTGKGGKSP RYAVSREQRL AMELFIKEST KSDSPPVIDT
DQVAIAKTLA TFHCIACHTR DDFGGVPDIY NMFFTGNDLK LGDDGRIPPP LTHVGAKLRP
AWLKKVLFDG ESVRPYMVTR MPQYGELNIG HLPEMFASVD HLQGKDLTIP DVEGAKPQDR
EREKLLRQAG RELLGDKGLN CIACHSFNGR SSQGSQGIDL LTSYQRLQPQ YFDSYLRNPG
SFRPRTVMPT AWPNGVATFT TILDGETDHQ IEAIWYYLSL GTSAADPSGL RSVNTKLVVD
GSKAQIHRGR SRIAGYRGIA VGLPERWNYA FNAETGTISG IWKGDYIQVN WSGQGSGDFQ
PATEAVTLPQ DVSFLQFEGE PTVWPRMPVM TKEARTNPDP LYPKNVGYQF RGYTLDEDHI
PTFSYRSGAV DIFDRTQILG DPGNERLQRI FRFESPTTQT LWFRGLAGKI TKEDSQTFRL
GNLRLSIPEI PFRLREIPDQ AGEVELLIPL QISQGQSTLE VNYELLSK