| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1425 |
|---|
| Symbol | |
|---|
| ID | 9138120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1827607 |
|---|
| End bp | 1829406 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_003629458 |
|---|
| Protein GI | 296121680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATTG TTGTTCAGAA GTTTGGTGGT ACCAGCGTCG CCGATGCTCA ACGAATTATG
GCAGCAGCCC GTCGCATCGT GGCCACGAAA CGGCAGGGCC ATCAAGTCGT CGCTGTTGTC
AGTGCCCGCG GCGAAAAAAC CGATGAACTT GTGGATCTCG CCAAAAGCAT TTCGGCCCAT
CCCAGACCTC GTGAGATGGA TATGCTCCTC TCGACTGGCG AACAGGAATC AGTCGCACTG
GTGGCCATGG CAGTGCATGA ACTGGGTGAA GATGCCGTCA GTCTGACCGG TGCCCAGATT
GGCATTCTCA CGGACAGTAC CTTTACCAAG GCCCGCATTC GGAAAATTAC GACTGACCGG
ATTCGTGCTG CGCTGGAAGC TGGCAAGATT GTCATTGCAG CCGGTTTTCA AGGTGTGGAT
GAAGATTCCA ACATCACAAC TCTGGGCCGC GGTGGCAGCG ATACGACAGC AACGGCTTTG
GCAGCGGTTC TGGAAGCCGA TGTCTGCGAA ATTTATACCG ACGTAGAAGG GATCTTTACC
ACCGACCCGA GGGCTGTCAA ACAGGCCCGA AAGATGGATC GTATTTCTTA CGATGAAATG
CTCGAACTGA CGAGTCTGGG CGGCGGGAAG ATGCATTCGC GATCCATCGA ATTCGCAAAG
AAGTATCGAG TTCCGCTGTT GGTTCGACCA TCATTTTCGG ATGGTGAAGG GACGCTGATT
GCCCCTCAAC TTGATGCTGA AGCACCGGTC GTTTCCGGGA TCGCTCTGGT GAAGAAAGAG
GCGATTGTCC ACCTGAGGAA CATTCCAGAT CGTCCGGGTG TTCTGGCGAT TGTCTTCCAC
TGCATGGCGA GCCGACGAAT ACCGATTGAT ATGGTGATTC AGGATATCGC CGAGGGAGGC
GTAGCAAATG TTTCGTTTAC CGTTCCTCAG GACGATCTTG CCGATACATT GACCGCAGCG
AATGAAGCTG CCGAGCGATT AGGGGCCGGT GATGTCGGCA GCAGCACGAA TCTGGCCAAA
CTAAGTGTGG TAGGTGCCGG CATGCGGACA CACACAGGTG TGGCTGCTCA CCTTTTCCAG
TCGCTGGCCG AAGCTAATGT CAGTATCCGC ATGATTACAA CCAGCGAGAT CAAGATTTCC
GTACTGGTAA ATCGCGATCA ATCCCAGGAA GCTCTGGAAG CAGTTCACTC AGGCTTTTCG
TTGCATCTGG ATCAGTCTCC ACAGCCTCGG ATTGGCTTTA AGCAGATTGA TCCGGAACGT
CAACGGGCGG GTGTCTCTCG CGATGAACTC GAGCAGGATG TTGTCCGCCG CCTACAAAGC
ATGGAAGATA TTGTCGTCAG TGATGTCCAA CTCGATACGG CTCAATCTCG AATCACTGTC
AAGAATGTCG CGGATCGTCC AGGGGTCGCA GCCGAGGTCT TTAAGGCCGT GGCTGAAGGT
GGCGTGATGG TCGATATGAT CGTCCAGAAT GTGGGCCAGG AACAACGAGC CGATCTTTCA
TTTACCGTCC CACGCCCCGA TCTGGAACGT TGCCTGCTGT TGATGCGGGA ACTGCTCGAA
CCGTGGCCGG AAACCTCGCT GCATTTCGAT AAGGATATTG CTCTCCTTGC AGTCATCGGC
ATTGGCTTGC GGAGCCATAC GGGAGTGGGC GAGAAGATGT TCACAGCTCT CGCGGAATCG
GGGATTAACA TCCAGATGGT CAACACCAGC GAAACGCGGA TCAGTGTCGT GGTGGGCACT
GCTGAAGCGG AAAAGGCGTT CGCAACGCTC AATCGTGTGT TCCATAAGCA AGGCAGGTAG
|
|---|
| Protein sequence | MSIVVQKFGG TSVADAQRIM AAARRIVATK RQGHQVVAVV SARGEKTDEL VDLAKSISAH
PRPREMDMLL STGEQESVAL VAMAVHELGE DAVSLTGAQI GILTDSTFTK ARIRKITTDR
IRAALEAGKI VIAAGFQGVD EDSNITTLGR GGSDTTATAL AAVLEADVCE IYTDVEGIFT
TDPRAVKQAR KMDRISYDEM LELTSLGGGK MHSRSIEFAK KYRVPLLVRP SFSDGEGTLI
APQLDAEAPV VSGIALVKKE AIVHLRNIPD RPGVLAIVFH CMASRRIPID MVIQDIAEGG
VANVSFTVPQ DDLADTLTAA NEAAERLGAG DVGSSTNLAK LSVVGAGMRT HTGVAAHLFQ
SLAEANVSIR MITTSEIKIS VLVNRDQSQE ALEAVHSGFS LHLDQSPQPR IGFKQIDPER
QRAGVSRDEL EQDVVRRLQS MEDIVVSDVQ LDTAQSRITV KNVADRPGVA AEVFKAVAEG
GVMVDMIVQN VGQEQRADLS FTVPRPDLER CLLLMRELLE PWPETSLHFD KDIALLAVIG
IGLRSHTGVG EKMFTALAES GINIQMVNTS ETRISVVVGT AEAEKAFATL NRVFHKQGR
|
|---|
| |