Gene Plim_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1420 
Symbol 
ID9138115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1820279 
End bp1821187 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629453 
Protein GI296121675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCA GTCTGTTATC CCGCTACCTC GATGCGGAAA CACTCGGTCG AGTGGCGGAT 
CGAACCATTG AGCCGCGGGG CATGGTTCTG GGCAATCTTG CCGGTGCTCA CAAGTCTCCC
CTTTGTGGCT TCGCGGTTGA GTTCGCCAGT CATCGCGAGT ACGTGCTTGG TGATGATGTC
CGGCACATTG ACTGGCGCTT GTACTACAAG AGGGATCGTT ACTTCATCAA GCAGTACGAG
ATGGAGACGA ACTTCGTCGC CCATCTGATT CTCGACATCA GTGCTTCGAT GAGATATGGC
GACGGACTCG AACAAAAACT CGCTTACGCA GCCCAGCTGG CAACGACTCT GGGTTATTCC
ATAGTCCGGC AGAACGATAA AGTCTCTTTG GCTACTTTTG ACAATCGCGT CCGCGGCTCG
ATTCCTGCAG GAAACTCGAT GTCACAAATC ATACGCATGG CCCGGCATCT GGATGAATGC
GATGCGGTTG ACAAGACCGA TATGGCCAGT TGCCTGTCGC AACTCAACAG CCGCTTTGCG
CGTCGTGAAA TCATCATGAT CTTCAGTGAT TTTTTGACAG ATGTGGAATC GCTGGAACCT
GTCCTGCAGC GGATGCGCTA TAACAATCAC GAAGTCGTGT TATTTCATGT TCTTCATCAC
CATGAAGTTG CTTTCGACTT CACGGGAATG GTGAAGTTCA AAGGTCTTGA ACTTCCGGAG
GAGTATCTCA CACAGACAGA AGATGTTCGG CGTGAGTATC TGGCTGCTTT CAATGAATAT
CTTGAAAACT TCAAACAGAT GTGCCTGCGA AATCGCATTG AACACATTGT GATGGATACA
AGAATCCCTG TTGCCGAAAC CTTGATCGAT TACCTGAACC GCAGGTCACT GGTCAAAGCC
ATTCGATAG
 
Protein sequence
MAGSLLSRYL DAETLGRVAD RTIEPRGMVL GNLAGAHKSP LCGFAVEFAS HREYVLGDDV 
RHIDWRLYYK RDRYFIKQYE METNFVAHLI LDISASMRYG DGLEQKLAYA AQLATTLGYS
IVRQNDKVSL ATFDNRVRGS IPAGNSMSQI IRMARHLDEC DAVDKTDMAS CLSQLNSRFA
RREIIMIFSD FLTDVESLEP VLQRMRYNNH EVVLFHVLHH HEVAFDFTGM VKFKGLELPE
EYLTQTEDVR REYLAAFNEY LENFKQMCLR NRIEHIVMDT RIPVAETLID YLNRRSLVKA
IR