Gene Plim_1412 details

Gene Information

• Locus tag: Plim_1412
• ID: 9138107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1803169
• End bp: 1803969
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 53%
• Product: protein of unknown function DUF455
• Protein accession: YP_003629445
• Protein GI: 296121667

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0410117
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTTC GCGAGTTTGC GGAACAGGTA CTGAAGTCAC CTTCGTGCAT GCAGAAAATT 
CAGCCCGTTC GGGAACAATT GACCGATCAG GCTCCTGGCA TGGCCGAAAA ACTCACACTT 
CCCGCTCGCG AAGAGAAGCT CACTTTCGGT GCCCGGAGGA CGGCACCACC CATGCCGGCC 
ATTCCTCGAT TTTCTGAACC TGCTCAACGT GCAATTGCCC ATCACATTAT GGCCAATCAT 
GAATTGCAGG CACTCGAAGT CATGGCGTGG GTATTGCTCG CATTTCCCGA GGCACCTACT 
GAGTTTCGTC TGGGGCTGGC GGAAGTCATG AAAGACGAAC AGCGGCACAC CCGCATGCAC 
ATGGAACGCT GTAAAGCTCT CGGGATCGAG TTTGGATCGC TACCCGTCAA CTCGTACATC 
TGGCGGCAGG CCATGACCTT CACATCCGTG ATGGATTACC TGGCTGGACT TCCTTTGACA 
TTCGAAGGCT GCAATCTCGA TCACAGTCTG GAACTCGAAG ACGTTTTTCA ATCGGTTGGT 
GATCTCAAAA GTGCAGCCAT CATGCGCCGC ATTCACGAAG ACGAAATCGA GCACGTGCGT 
TTTGGCCTCG AATGGCTCCG CAGACTCAAG CCACCCACAA TGACCGATTG GGAAGCGTAT 
GAAACGCATC TGCACTTTCC CATGAGGCCG TCCAAATCGG TCGGTCACCA ACTCGATGAG 
GCTTCAAGAT ACAAAACAGG GATGGATGAA GAATTCGTAT CGAGGCTCAA AGCCACTCAT 
ACAGGGTCGA TTCGAAAGTA A 

 

Protein sequence

MELREFAEQV LKSPSCMQKI QPVREQLTDQ APGMAEKLTL PAREEKLTFG ARRTAPPMPA 
IPRFSEPAQR AIAHHIMANH ELQALEVMAW VLLAFPEAPT EFRLGLAEVM KDEQRHTRMH 
MERCKALGIE FGSLPVNSYI WRQAMTFTSV MDYLAGLPLT FEGCNLDHSL ELEDVFQSVG 
DLKSAAIMRR IHEDEIEHVR FGLEWLRRLK PPTMTDWEAY ETHLHFPMRP SKSVGHQLDE 
ASRYKTGMDE EFVSRLKATH TGSIRK