| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1398 |
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| Symbol | |
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| ID | 9138093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1778889 |
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| End bp | 1779875 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003629431 |
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| Protein GI | 296121653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCCA TTGCACGTCC TTTCTTTCAG ATCCTGGCCG TTGGAATCAC CCTTTCAACC
ATCGGTGGAT TATCTCCCGG ACGAAATCAA GCGGCAGAGC CAACCAGCGA GTGGAAGCTC
ACGTGGAGCG ACGAGTTTGC TGGCAGTGAG ATTGATCGTA AGAAATGGGA TTTCGATCTC
GGGAACGGCT TCTACAACTA CCATTCCAAC CAATGGATCA GTGGTTGGGG TAACAACGAA
CTGCAGTATT ACACCAAAGA ACCAGAGAAT GCGTTCATTC GCGACGGCAT GCTGCATATT
CGAGCGGTCA AGGAATCGTA TCAGGGATGT GGCTATACAT CCGCCAAGCT GAAGACACGC
CAGCGGGATG GTTCTCCGCT CTTCAACCAG AAGTATGGCA AATTTGAATT TCGAGCCAAG
TTACCCACCG AGAAAGGTGT CTGGCCCGCT CTCTGGATGC TGCCACAGGG CGATTCCTAT
GGGCCCTGGG CAGCCTCTGG CGAGATCGAC GTCATGGAAG CTCGCGGACA GGAACCTGGA
AAAGTCTTAG GGACAGTACA CTACGGCGGC AGATGGCCTC AGAATGCCCA TAGCGGAGAT
GAGTTTATCT TTCCGGCAGG GACATCGATG GCTGACTTTC ACACCTACGC GGTCGAATGG
GAACCGGGAA AGATCAGTTG GCTGGTCGAT GGAAAGGTTT ATCAAACTCA AAACTTCTGG
TGGAGTACCA GTGGTGTTCA AGGCACTTCT GGACAGGGGA AGAAGCCAGC CGGAGAACAG
GATCTGAATC CGTGGCCAGC CCCGTTTGAC CAGCCGTTTT ATCTGATCAT GAACGTGGCC
GTGGGAGGGA ATTTTCTGGG CCCACCCGAT GAGAAATCCC AGTTTCCTGC AGAGATGATT
GTGGACTATG TGCGTGTCTA CAGTTCGACA AAGCCTGCCT CGATCGTTCC GCCCCGAGGC
GAAGGAAAAT TGCCATTCCA GCCTTGA
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| Protein sequence | MNSIARPFFQ ILAVGITLST IGGLSPGRNQ AAEPTSEWKL TWSDEFAGSE IDRKKWDFDL
GNGFYNYHSN QWISGWGNNE LQYYTKEPEN AFIRDGMLHI RAVKESYQGC GYTSAKLKTR
QRDGSPLFNQ KYGKFEFRAK LPTEKGVWPA LWMLPQGDSY GPWAASGEID VMEARGQEPG
KVLGTVHYGG RWPQNAHSGD EFIFPAGTSM ADFHTYAVEW EPGKISWLVD GKVYQTQNFW
WSTSGVQGTS GQGKKPAGEQ DLNPWPAPFD QPFYLIMNVA VGGNFLGPPD EKSQFPAEMI
VDYVRVYSST KPASIVPPRG EGKLPFQP
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