Gene Plim_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1390 
Symbol 
ID9138085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1771726 
End bp1772184 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629423 
Protein GI296121645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.457009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATA CAGCAGGTCT TTCTGGTGAT TCACTCCACG AAAAATCATC CGCTACCAGT 
GCAAACACAG GCAGCATCTT TGATGATGGA GATACTGCCT GTCCCCCATC CAAACCACGT
CAAAAACCGG CCGTCCGCAA TGACGTCCTC CAGGTTTATC AGACCGGGGC TTTGACTGTG
GTGGGTTTTG GCGGGCAGGA TGTTCCCGAT GAAGTCTGCA TTGCTTCCTA TCGCGAGCAA
TTGCGAAAAC TACTCGAAGA CAACACTTGT TCAGTCCTCG CATTTGACTG CAGTGGCGTC
AAATTAATGC CCAGTGGCAT GCTCGGCTTG CTCACAACCT TGCGAAAGCA GGTTGACAGG
ATCGAACTTT ATAATCCGAG CGAAGATATC CAGCAGGTCC TCCGATTGAC GAATCTCCTT
CCCATGTTTG AGGTTAAGTC AATCACCGTC GCTTCCTGA
 
Protein sequence
MADTAGLSGD SLHEKSSATS ANTGSIFDDG DTACPPSKPR QKPAVRNDVL QVYQTGALTV 
VGFGGQDVPD EVCIASYREQ LRKLLEDNTC SVLAFDCSGV KLMPSGMLGL LTTLRKQVDR
IELYNPSEDI QQVLRLTNLL PMFEVKSITV AS