| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1384 |
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| Symbol | |
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| ID | 9138079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1763673 |
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| End bp | 1767590 |
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| Gene Length | 3918 bp |
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| Protein Length | 1305 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003629417 |
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| Protein GI | 296121639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.144914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGC TCTCACCGGC CCCTACGGCC CCAGACTTTG CTGCGTTGAG AAAGCGACTG
CCCGAAGCAA TGGCCGCTGA TCGATCAGGG CTTTCAAAGC TGCTCGAAAC AACAGCCCGC
ATGGCCCAGC GCGGCCAGCC GTTTGATCGC AACCTGCATC GATTCACGGA TTGGCTGGAA
AAATCGATCA CAGCCCGCAA TGACCGCTTG GCGCGCAGGC CAGCCATTCA TTACGACAAC
GAGCTGCCTA TCATGCAGCG GCGGGAAGAG TTTCTGAAAC TCTTATCCCA GCATTCAGTG
ATCATCGTTT GCGGAGAAAC AGGCTCAGGA AAATCGACGC AACTGCCCAA ATTCTGCCTT
GAGGCCCAGC GCGGAATCGA TGGACTGATC GGACATACTC AGCCACGGCG AATTGCCGCT
CGATCAGTCG CCATGCGGCT TTCCGAAGAA CTTCGTGCAC CTTTAGGGCA GGCTGTTGGC
TACAAAGTTC GCTTTCAGGA GGCCGTGGGA GCTGAGTCAT ACATCAAGCT GATGACTGAC
GGAATTCTCC TTGCAGAAAT TCAATCGGAC CCGCACTTGC GTCGTTACGA CACGATCATC
ATCGATGAGG CGCACGAGCG GTCGCTCAAC ATCGATTTTC TGCTCGGGTA TCTCAAGCGA
TTGCTGACAC AGCGCAAAGA TCTCAAGGTG ATCATTACTT CGGCAACGAT CGATGCCGAG
CGGTTCAGCC AGCATTTTGA AGTGGATGGC AAACCCGCTC CGATCATAGA AGCCTCCGGA
AGAAGTTATC CCGTCGAGAT TCTTTACCGG CCCATTTTGA GTAAGGGGGA TGCGGCGGAA
GACAATGATA TCGACATGCA ACAGGCGATT GTCGAAGCCG TTCAGGAAGC GACTTCGCAG
GGGTTTGGAG ACATTCTGGT TTTCTTGCCC ACCGAACGGG AAATCCACGA GACAGCGAAG
ATTTTGCGTG GAGGCGAGCG AGCGGCTTCT CATCGTGAGA TTCTGCCGCT GTATGCGAGA
CTTTCTGCAG CCGAGCAACA GCGAGTGTTC CAAGTTTCTC AGAGCCAGCG CAGAATCATT
CTTGCAACCA ACGTGGCCGA GTCGTCATTG ACTGTACCCG GCATTCGCTA TGTGATCGAC
ACAGGGACCG TGAGGCTCAG CAGGTATTCT CCACGTTCGA AGATCCAGCG ATTGCCCATT
GAACCGGTCT CCCAGGCCTC AGCGAATCAG CGGGCAGGAC GCTGCGGGCG TGTCGGCCCC
GGAATCTGCT ATCGACTGTA TGATGAAGCG GATTTTGCAG CGCGTGATCC GTTCACAGTT
CCAGAGATTT TGCGAACGAA CCTTGCTCAG GTGATTCTTA AAACAGAATC GCTCGGGCTC
GGAAGCCTGT CGAGTTTTCC GTTTCTGGAT CCACCTCGAA CTGAATCAAT TCGAGATGGT
TATCGCACCT TGTTCGAGCT GGGTGCCGTC GATCTGGACA ATCGTCTGAC GGAACTCGGG
AAGAAACTGT CGCGGATACC GACCGATCCT CGCATTGCCC GTGTCCTGTT CGCTGCCGAC
GAACAGCTTT GCCTCGCCGA AATGCTGATC ATTGCCTCTG CCCTGGAAAC ACAGGATGTG
CGCGAGCGAC CGGTTGGGAA ACAGGATGCA GCCGATGAAG CCCATGCAAA GTTTCTGGAC
GAAACCTCGG ACTTTGTGAC ATATCTCAAG ATCTGGGATT TTTATCACGA ATTGAAAGCC
AAGCTGTCAC ATAGCCAGCT TAAAAAGGCG TGCTCCCAGA ATTATCTCTC ATTAACCAGA
TTGAGAGAGT GGAGCGATCT GCATCGAGAG TTGTCTGAAC TCGTTCGTGC CGCAGGGTTA
AAGATTCGCC CCCGTTTGCA GGATACCTCT GCCATCCATC GGGCGATTCT GGCTGGATTC
CCAACCAACA TCGCCATGAA AACTGATAGC GGTGAGTATC AGATGGGTGG TGGAGCACTG
GGTGTCATCT GGCCTGGTTC CGGGATGGCG AAACAGAAGC CTCGCTGGAT TGTGGCTGCC
GAGTTTGTGG AAACGACTCG CCGCTTTTTG CGAATTGCAG GAAAGATTGA ATCCGAGTGG
GTCGAGCCCT ATGTCGAACA TCTGGTCAAT CGAACCTATC ATGATCCCCA CTGGGATGCC
CGTAGCCGGA GTGTGGTCGC TTATGAAAAG GTGAGTCTGC AAGGACTGCC AATCGTTAAT
CGGCGGAAGA CTCAATTCGG ACGAGTGAAT GCGGCCCAGG CGCAGGAGAT TTTTATCCGT
CAAGCTCTCG TGGAAGGTGA TTATCCGAAT CCTCCCGCAT TCCTGGCTCA CAATCTGGCA
TTAAGGCAGG AACTGGAAGA TCTGCAGGCG CGGCTGAGAA AAACCTCGCT GATTGCTGAT
CCAGAAACCC AGGCGAAGTT CTATGCTCAA AGATTGCCTC CTGATATCTA CGACGGCCCG
CGACTGGATA AATGGCTGAG AATTGCAACT AAAGATTCGC CCGATCTCCT CAAAATGACG
CGGGAAGACC TGCTGGCCCA GGAGGCTGAT GAAGATTGGC GAGAACGATT TCCTGACCAG
ATTCGTGTGG GGAGTCTGCA GGCCGAAGTC GAATATCATC TGGAACCAGG GACGGCTCAA
GATGGGATTA CGATCAAGGT TCCACAAGCG GCGTTTCGTC AGCTGGAGTG GCAGCGATTG
GGTTGGCTCG TTCCAGGCCT TCTTGAGGAA AAAATTGTCG CGTTGCTTCG AGGATTACCC
AAAGAGTATC GAGTGACACT TTCCCCGATC CCGGAGTCTG TCAAACAGAT TCTCCCTTTG
CTGAAGATGG GACAAGGTTC GCTCGTCGAT CAACTGGCAG AGATCGTCCG GAGTCGCTTC
GGGGCCAGAG TCCTTCCAGC GATGTTTGAT GAATCGAAGC TCCCGAATCA TTTGCGAATG
AACATCCGCC TGATTGATAA CTCAGGTGAG GAAGTTCTTT CCAGTCGAGA GCAAACTCAA
CTGGAAGCTC ATGCCGGGCA GCTCATTCCC AGTGAACTGA TTTCCAAATC GATGGAGCGA
ACGGGCCTGA AGACCTGGGA CTTTGCGACG GTCCACGAAA AGGTGATCGT ACGGCAGAAC
GGGCTCGAAA TTGATGGTTT TCCTGCCATT GTCGATGAGG GGAAGACAGT GGGTCTGAAG
CTTTTTGATA CCGCCATTCG CGCACTCCAC GAGCATAAGC GAGGCGTGCG GCGACTGGCT
GTTCTAAAGC TTCAGAAAGA ACTCTCGATG CAGGTGACCC ACCTGCCAGA GATCAAACGC
TGGGAACTGG CTGCCAAAGC GCTTCCACAA CCCTTCCCAC TTAAAGAGCA TTTGATCGAT
CTGCTGGCGA TGAGGGCCGT CTGTGAGGGA AAAGTCTTGC CGCGCTCTCC CGAACAATTC
CAGTTAGCGA TTGATGCCGG GTTTGATGAA CTGGGAAATG CTGTCACTGA AGTGATGCGA
TTGATGAGTA GCATTTTTCA ACAGACGGCA GAAATTCGAG TGCGGCTGGA TCGAATTCCG
CCGGTGCATG ATCTGACCAA GCGCGATCTG CAGAGGCAGT ATCAATGGCT GTTAACGCCT
GGTTTTCTGT CGCAGACACC GTGGTTCTGG CTGGCCCAGT TCCCCAGATA TCTGAAAGCA
ATCCTGCTGC GAATGGATCG ACTCACGGGC AACGCGGCCA AAGATCGTGA TCGAATCATG
AATCTGGAGC CCTGGATTGT GCGTTATGCC CAAAGATGGA ATGAACACAA GCGGCGAAAA
TATGTCGATG TTGAGTTAGA AACCTTCCGC TGGATGATTG AAGAATATCG GATTCATCTG
TTTGTTCAGG AAATGGCGAC CGCTGTGCCC GTTTCGGATA AACGGCTGGA GAAACAGTGG
CTGGCGACCA CCCCTTAG
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| Protein sequence | MDALSPAPTA PDFAALRKRL PEAMAADRSG LSKLLETTAR MAQRGQPFDR NLHRFTDWLE
KSITARNDRL ARRPAIHYDN ELPIMQRREE FLKLLSQHSV IIVCGETGSG KSTQLPKFCL
EAQRGIDGLI GHTQPRRIAA RSVAMRLSEE LRAPLGQAVG YKVRFQEAVG AESYIKLMTD
GILLAEIQSD PHLRRYDTII IDEAHERSLN IDFLLGYLKR LLTQRKDLKV IITSATIDAE
RFSQHFEVDG KPAPIIEASG RSYPVEILYR PILSKGDAAE DNDIDMQQAI VEAVQEATSQ
GFGDILVFLP TEREIHETAK ILRGGERAAS HREILPLYAR LSAAEQQRVF QVSQSQRRII
LATNVAESSL TVPGIRYVID TGTVRLSRYS PRSKIQRLPI EPVSQASANQ RAGRCGRVGP
GICYRLYDEA DFAARDPFTV PEILRTNLAQ VILKTESLGL GSLSSFPFLD PPRTESIRDG
YRTLFELGAV DLDNRLTELG KKLSRIPTDP RIARVLFAAD EQLCLAEMLI IASALETQDV
RERPVGKQDA ADEAHAKFLD ETSDFVTYLK IWDFYHELKA KLSHSQLKKA CSQNYLSLTR
LREWSDLHRE LSELVRAAGL KIRPRLQDTS AIHRAILAGF PTNIAMKTDS GEYQMGGGAL
GVIWPGSGMA KQKPRWIVAA EFVETTRRFL RIAGKIESEW VEPYVEHLVN RTYHDPHWDA
RSRSVVAYEK VSLQGLPIVN RRKTQFGRVN AAQAQEIFIR QALVEGDYPN PPAFLAHNLA
LRQELEDLQA RLRKTSLIAD PETQAKFYAQ RLPPDIYDGP RLDKWLRIAT KDSPDLLKMT
REDLLAQEAD EDWRERFPDQ IRVGSLQAEV EYHLEPGTAQ DGITIKVPQA AFRQLEWQRL
GWLVPGLLEE KIVALLRGLP KEYRVTLSPI PESVKQILPL LKMGQGSLVD QLAEIVRSRF
GARVLPAMFD ESKLPNHLRM NIRLIDNSGE EVLSSREQTQ LEAHAGQLIP SELISKSMER
TGLKTWDFAT VHEKVIVRQN GLEIDGFPAI VDEGKTVGLK LFDTAIRALH EHKRGVRRLA
VLKLQKELSM QVTHLPEIKR WELAAKALPQ PFPLKEHLID LLAMRAVCEG KVLPRSPEQF
QLAIDAGFDE LGNAVTEVMR LMSSIFQQTA EIRVRLDRIP PVHDLTKRDL QRQYQWLLTP
GFLSQTPWFW LAQFPRYLKA ILLRMDRLTG NAAKDRDRIM NLEPWIVRYA QRWNEHKRRK
YVDVELETFR WMIEEYRIHL FVQEMATAVP VSDKRLEKQW LATTP
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