Gene Plim_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1373 
Symbol 
ID9138068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1746756 
End bp1748411 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content53% 
IMG OID 
Productribulose-1,5-bisphosphate carboxylase/oxygenase large subunit 
Protein accessionYP_003629406 
Protein GI296121628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCGAG TTCTCTATCA ACTGAATTGT CCCAAGAACT CTGCAGAAGC TGTTGCCAGA 
GATATTGCAC TCGAACAGAC GGTCGAGGTG CCAGAGTCAT TGATCACGGA TGAAGTGATC
TGGCAGAACT TCGCTGGCCA GGTGGTCTCT GTTCGATCAG TCTCTGAGCA TGTTCAGGTG
GCTTCGATTG AATACCACGC TCATCTGGCG AGTGGACACT TGGCGCAGTT GATGAACCTG
CTGTTTGGAA ATGTCAGTCT GAAACCCGGG GTTCGATTAT TAGATGTCGA GTTTCCGGAA
TCTTTTCTCA GTGGATTGGC TGGGCCTAAA CTTGGGATTG AAGGTCTCCG GTCAGCCTGC
GGCGTTTGGG AGCGTCCTCT GCTGGCGACC GCCATCAAGC CTAAGGGGTC GTCGGTCGCG
CAACTGGCAC AGATCGCGGG AGAGTTTGCG GCTGGGGGCG GTGATCTCGT CAAGGATGAT
CACAATCTTG CAGAGAGCAC GTTCGACGCC TTCCGAACTC GTGTCGAAGC CTGCCAGCAA
GCCGTGCTTT CAAAGACTCC TCCAGGACAA AAATGCCTTT ATTTTCCCAA TCTTTCCGGG
ACGCTGCGTG ATCTGGAACG GCAGGCAGCA TTTTGTGTGG AATCCGGCAT TCGGGGTGTC
CTCGTGGCAC CTATGATTGC CGGTCTCGAA ACCATCCGCC ATCTGTCGGA ATCTTTTCCC
TTGGCGATAC TTGCCCATCC GACAATGTCC GGTTCATTCC TGCAGGAAGG GCAGGGCCTA
TCGCATGCAT TCTGGCTTTC GACCATGATG CGTCTGTGCG GTTGTGATGG AACTGTGTTC
CCCAATACGG GAGGAAGGTT TTCCTTCTCA CAGGCAGATT GTCTGTCGAT CGCAGACGCG
GCACGAAAAC CTCTCGGACG ATTGAAGAGT TGTTTCCCGG CACCGGCGGG AGGCATGTCG
TATGCATCGC TTCCAGGAAT GGCTCGCGAC TACGGCCCGG ACACGATCTT TCTGGTCGGA
GGCGGACTAC TCGGTTACTC AGAAAATCTC GCAGACAGCA CGGCGGCATT TCGCTCCAGA
ATCGAAGAAC TGTTCCTCAC GAATCAAGCG TCTCAGAATT CCAATCCGGA TCCTCGTGGC
CAGTATGTTT CTTCGTGTGA ACTGCCAGCA GCGTATCCAC CAGGAGCTCA AAATTCTGGC
ATCGCCGAGT ATGCTCAGGG AAATGAAAAG TCAGGAATCT CGTCTTTAGA TTCTGCCAAT
TCGATCGTGA CTCAACTGCT CAAGTTTTTG CCTGGTTATC GATGGGAAAA ACGCGAAGTT
TCGGTTTACA AACCTAATGC TGGCTTGCCA TTTGCGCATG TGGATCGACA GGAACTGATT
GGGAAGTTTG GAGAGTCAAC GGCATTTGAT GTGCGATACT TCGAACTGGC GCCCGGTGGC
TATTCGAGTC GTGAAAAGCA TTTCCATACG CATGTCGTAA TTCCCGTTCG CGGCCAGGGT
CAATTGGAGT GCCAGGGACA GATTTTTCCT TTGCAGCACC TGGATATTGC TTACGTTCCG
CCACTGGCTG TGCATCAATT GTCCAATCCA ACCGATGAAC CATTTGGTTT TCTGTGCATT
GTTGATCATG ATCGTGATGC GCCGATGGCC CCTTAA
 
Protein sequence
MFRVLYQLNC PKNSAEAVAR DIALEQTVEV PESLITDEVI WQNFAGQVVS VRSVSEHVQV 
ASIEYHAHLA SGHLAQLMNL LFGNVSLKPG VRLLDVEFPE SFLSGLAGPK LGIEGLRSAC
GVWERPLLAT AIKPKGSSVA QLAQIAGEFA AGGGDLVKDD HNLAESTFDA FRTRVEACQQ
AVLSKTPPGQ KCLYFPNLSG TLRDLERQAA FCVESGIRGV LVAPMIAGLE TIRHLSESFP
LAILAHPTMS GSFLQEGQGL SHAFWLSTMM RLCGCDGTVF PNTGGRFSFS QADCLSIADA
ARKPLGRLKS CFPAPAGGMS YASLPGMARD YGPDTIFLVG GGLLGYSENL ADSTAAFRSR
IEELFLTNQA SQNSNPDPRG QYVSSCELPA AYPPGAQNSG IAEYAQGNEK SGISSLDSAN
SIVTQLLKFL PGYRWEKREV SVYKPNAGLP FAHVDRQELI GKFGESTAFD VRYFELAPGG
YSSREKHFHT HVVIPVRGQG QLECQGQIFP LQHLDIAYVP PLAVHQLSNP TDEPFGFLCI
VDHDRDAPMA P