Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1373 |
Symbol | |
ID | 9138068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1746756 |
End bp | 1748411 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit |
Protein accession | YP_003629406 |
Protein GI | 296121628 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTCGAG TTCTCTATCA ACTGAATTGT CCCAAGAACT CTGCAGAAGC TGTTGCCAGA GATATTGCAC TCGAACAGAC GGTCGAGGTG CCAGAGTCAT TGATCACGGA TGAAGTGATC TGGCAGAACT TCGCTGGCCA GGTGGTCTCT GTTCGATCAG TCTCTGAGCA TGTTCAGGTG GCTTCGATTG AATACCACGC TCATCTGGCG AGTGGACACT TGGCGCAGTT GATGAACCTG CTGTTTGGAA ATGTCAGTCT GAAACCCGGG GTTCGATTAT TAGATGTCGA GTTTCCGGAA TCTTTTCTCA GTGGATTGGC TGGGCCTAAA CTTGGGATTG AAGGTCTCCG GTCAGCCTGC GGCGTTTGGG AGCGTCCTCT GCTGGCGACC GCCATCAAGC CTAAGGGGTC GTCGGTCGCG CAACTGGCAC AGATCGCGGG AGAGTTTGCG GCTGGGGGCG GTGATCTCGT CAAGGATGAT CACAATCTTG CAGAGAGCAC GTTCGACGCC TTCCGAACTC GTGTCGAAGC CTGCCAGCAA GCCGTGCTTT CAAAGACTCC TCCAGGACAA AAATGCCTTT ATTTTCCCAA TCTTTCCGGG ACGCTGCGTG ATCTGGAACG GCAGGCAGCA TTTTGTGTGG AATCCGGCAT TCGGGGTGTC CTCGTGGCAC CTATGATTGC CGGTCTCGAA ACCATCCGCC ATCTGTCGGA ATCTTTTCCC TTGGCGATAC TTGCCCATCC GACAATGTCC GGTTCATTCC TGCAGGAAGG GCAGGGCCTA TCGCATGCAT TCTGGCTTTC GACCATGATG CGTCTGTGCG GTTGTGATGG AACTGTGTTC CCCAATACGG GAGGAAGGTT TTCCTTCTCA CAGGCAGATT GTCTGTCGAT CGCAGACGCG GCACGAAAAC CTCTCGGACG ATTGAAGAGT TGTTTCCCGG CACCGGCGGG AGGCATGTCG TATGCATCGC TTCCAGGAAT GGCTCGCGAC TACGGCCCGG ACACGATCTT TCTGGTCGGA GGCGGACTAC TCGGTTACTC AGAAAATCTC GCAGACAGCA CGGCGGCATT TCGCTCCAGA ATCGAAGAAC TGTTCCTCAC GAATCAAGCG TCTCAGAATT CCAATCCGGA TCCTCGTGGC CAGTATGTTT CTTCGTGTGA ACTGCCAGCA GCGTATCCAC CAGGAGCTCA AAATTCTGGC ATCGCCGAGT ATGCTCAGGG AAATGAAAAG TCAGGAATCT CGTCTTTAGA TTCTGCCAAT TCGATCGTGA CTCAACTGCT CAAGTTTTTG CCTGGTTATC GATGGGAAAA ACGCGAAGTT TCGGTTTACA AACCTAATGC TGGCTTGCCA TTTGCGCATG TGGATCGACA GGAACTGATT GGGAAGTTTG GAGAGTCAAC GGCATTTGAT GTGCGATACT TCGAACTGGC GCCCGGTGGC TATTCGAGTC GTGAAAAGCA TTTCCATACG CATGTCGTAA TTCCCGTTCG CGGCCAGGGT CAATTGGAGT GCCAGGGACA GATTTTTCCT TTGCAGCACC TGGATATTGC TTACGTTCCG CCACTGGCTG TGCATCAATT GTCCAATCCA ACCGATGAAC CATTTGGTTT TCTGTGCATT GTTGATCATG ATCGTGATGC GCCGATGGCC CCTTAA
|
Protein sequence | MFRVLYQLNC PKNSAEAVAR DIALEQTVEV PESLITDEVI WQNFAGQVVS VRSVSEHVQV ASIEYHAHLA SGHLAQLMNL LFGNVSLKPG VRLLDVEFPE SFLSGLAGPK LGIEGLRSAC GVWERPLLAT AIKPKGSSVA QLAQIAGEFA AGGGDLVKDD HNLAESTFDA FRTRVEACQQ AVLSKTPPGQ KCLYFPNLSG TLRDLERQAA FCVESGIRGV LVAPMIAGLE TIRHLSESFP LAILAHPTMS GSFLQEGQGL SHAFWLSTMM RLCGCDGTVF PNTGGRFSFS QADCLSIADA ARKPLGRLKS CFPAPAGGMS YASLPGMARD YGPDTIFLVG GGLLGYSENL ADSTAAFRSR IEELFLTNQA SQNSNPDPRG QYVSSCELPA AYPPGAQNSG IAEYAQGNEK SGISSLDSAN SIVTQLLKFL PGYRWEKREV SVYKPNAGLP FAHVDRQELI GKFGESTAFD VRYFELAPGG YSSREKHFHT HVVIPVRGQG QLECQGQIFP LQHLDIAYVP PLAVHQLSNP TDEPFGFLCI VDHDRDAPMA P
|
| |