| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1371 |
|---|
| Symbol | |
|---|
| ID | 9138066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1744834 |
|---|
| End bp | 1745757 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_003629404 |
|---|
| Protein GI | 296121626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.506801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGAGT TTGCTCCCGG AAAGACACGT ATCGGCTGGA TCGGCACTGG GGTCATGGGC
CGCAGCATGG TCGGTCACCT GATGAACGCC GGCTATACCG CCACAATTTA CACCCGCAGT
CCGGAGAAAG CGGCTGATCT GATTTCGCGA GGTGCTCAGT GGGCAGCCAC ACCTGCGGAA
GTCGCCGCCA ATTCCGACGT CGTCTTTTCA ATTGTCGGTT TTCCGTCGGA TGTCCGGGAA
GTCACACTCG GGACCAAAGG TGCTCTCGCC GGGGCAGCGG CTAACACCGT CCTCGTCGAT
ATGACGACCA GCGAACCTTC TCTCGCCGTT GAGATCTATC AGGCAGCCAA GGCGAAGCAT
GTCCATGCTG TCGATGCTCC TGTTTCCGGT GGAGATATCG GTGCGAAGAA TGCAGCCCTC
TCCATCATGG TGGGAGGAGA CGCAGAAGTG GTCAACGCCT TGCAGCCATT GTTTTCCGTC
ATGGGGAAAA CAATTGTGCA TCAAGGGGGG CCCGGGGCTG GGCAACATAC AAAAATGGTC
AATCAGATTC TGATCAGCAC AGGCATGATC GGTGTCTGCG AGGCCTTGTT ATATGGTTAT
AGAGCCGGCC TGGATCTTAA TACAGTGATG CAATCGGTCG GGCCAGGTGC AGCCGGAAGC
TGGTCGCTTT CGAATCTGGG CCCACGCATG ATTGCGAATA ATTTCGACCC GGGATTTTTC
GTAGAACATT TCATCAAAGA CATGGGAATT GCACTGGCCG AATCCCGCCG GATGGGTCTT
TCCTTACCTG GTCTGGCACT CGCAGAACAA TTGTATCTCT CAGTGAAAGC CAAAGGTTTT
GGCCGCAATG GGACTCACGC ATTGATGCTG GCACTTGCAG AAATGTCCAA TATCGATTGG
CGCAACCGTA CCAGCAATTC GTAA
|
|---|
| Protein sequence | MLEFAPGKTR IGWIGTGVMG RSMVGHLMNA GYTATIYTRS PEKAADLISR GAQWAATPAE
VAANSDVVFS IVGFPSDVRE VTLGTKGALA GAAANTVLVD MTTSEPSLAV EIYQAAKAKH
VHAVDAPVSG GDIGAKNAAL SIMVGGDAEV VNALQPLFSV MGKTIVHQGG PGAGQHTKMV
NQILISTGMI GVCEALLYGY RAGLDLNTVM QSVGPGAAGS WSLSNLGPRM IANNFDPGFF
VEHFIKDMGI ALAESRRMGL SLPGLALAEQ LYLSVKAKGF GRNGTHALML ALAEMSNIDW
RNRTSNS
|
|---|
| |