Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1342 |
Symbol | |
ID | 9138036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1711188 |
End bp | 1713050 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_003629375 |
Protein GI | 296121597 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.372378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCGGAA TCGTCGGCTA CATCGGCGCC AAGCCAGCGT CAAACTACCT GCTGGAAGGT CTGTTTCGTC TTGAGTACCG AGGGTATGAC AGCGCAGGAA TCGCAGTTCA ATCCGGCGAT ACGATTGCTG TTCGCAAAAA GACGGGGCGA GTCGGTCAAC TTGCTGAACT CTTAAAAGCG AGCCCGGTGA CTGGCACTCA TGGCATTGGC CACACACGCT GGGCGACACA TGGTCAGCCT TCAGATAACA ACTCTCACCC GCATACCGGC GGAAATGGTG AAGTCGTCCT CGTTCACAAC GGTGTGATCG AAAACTACGC GACCCTTCGC AGCCAGCTCC AGGAACTCGG CTACGTCTTC CACTCACAGA CCGATACTGA AGTTGTTGCT CATCTGGTGG CGCACCAACT GGAAGAAGAA CTCAAGCTCG GTGCAGATCC CGACTCAAAC GCAACCTATC TGCGAGCGGT TGAACTGACC CTGAAGCAAC TCAAAGGGAC TTACGGCCTG GGTGTTCTCT TTCGAGATAA ACCCGGTCTG CTCATTGCCG CCCGCCTGGG AAGCCCATTA GTCGTGGGTG TCGGCAAAGA CGAACATTAC CTGGCCAGCG ATGCCAGCCC CCTGGTGGGA TACACCGACA AGGTGGTCTA CCTCAATGAC CACGAAATCG CCATGATCAC TGCAAATTCT CTGGAAATTC TGCATCGCGA TACCGGCTCT CAAACTCCTC ACATTCGTGT GCTCGAACAA ACCGCATCGG ATACCGAGCT CGGGCAGTTT GAACATTACA TGCTCAAGGA AATCTTTGAG CAGCCGACAT CCATTGAAAA CGCCTTCCGT GGACGACTCG ACGATGATGA AGCCACGGCA CGATTTGGTG GCCTGAATCT CGACCCGCAG GAACTCCGCC GCATTGACCG AATCGTGCTC ACAGCCTGTG GCACGAGCTG GCATGCAGGT CTCGTGGGTG AATACATCAT CGAAGAGTTT GCCCGCATAC CTGTCGAAGT CGAATATGCC AGCGAACTGC GTTATCGCAA TCCCCCCATG TCCGAGCGAA CAATGGTCTT CGCCATCACT CAAAGTGGGG AAACTGCCGA TACTCTGGCG GCCATGCGTG AATGCAAACG CAAAGGACAC CCGACTCTCG CCATCTGCAA CGTTGTCGGG TCGTCAATCG CCCGCGAAGC CGACGGTGGA ATTTATCTGC ATGCCGGCCC GGAAGTGGGT GTTGCATCGA CCAAGGCCTT CACATCCCAG GTGACAGTCC TCACTTTGCT CGCACTCTTC ATGGGACGCA TTCGCCACCT TTCTTATCCG GCGGGCCAGC GCATGATTGC CAACCTGCGA AAAATGCCCG ACAAGATTCG CCAGACGCTC GAATGCCATA ACCGCGTCAA AGAGATCGCT CGAAAGTACT ACACTGCTGA AAACTTCCTT TACCTGGGAC GTCTGCACAA CTTCCCCGTC GCGCTGGAAG GGGCTCTCAA GCTGAAGGAA ATCAGTTACA TCCATGCCGA GGGCTATCCT GCCGCCGAGA TGAAACATGG GCCTATCGCG CTGGTTGACG AACAGACGCC CAGTGTCTTC GTCGTTCCCC GTTGTCAGAT TTACCCCAAA GTCATCAGCA ACATGGAAGA AGTCCGTGCC CGTCGTGGCC CGATTATCGC CATCGCCTGT GAAGGTGACG ACAAAGTCGC TGAACTGGCA GACGACGTGA TCTATGTGCC CGATGTCGAT GAATACCTCC AGCCGATGGT GACATCAGTC CCACTGCAGC TTTTGGCCTA CGAAATCGCC CTGCTCCGCG GCTGCAACGT TGATCGCCCC CGCAATCTCG CCAAGAGCGT CACGGTGGAA TAG
|
Protein sequence | MCGIVGYIGA KPASNYLLEG LFRLEYRGYD SAGIAVQSGD TIAVRKKTGR VGQLAELLKA SPVTGTHGIG HTRWATHGQP SDNNSHPHTG GNGEVVLVHN GVIENYATLR SQLQELGYVF HSQTDTEVVA HLVAHQLEEE LKLGADPDSN ATYLRAVELT LKQLKGTYGL GVLFRDKPGL LIAARLGSPL VVGVGKDEHY LASDASPLVG YTDKVVYLND HEIAMITANS LEILHRDTGS QTPHIRVLEQ TASDTELGQF EHYMLKEIFE QPTSIENAFR GRLDDDEATA RFGGLNLDPQ ELRRIDRIVL TACGTSWHAG LVGEYIIEEF ARIPVEVEYA SELRYRNPPM SERTMVFAIT QSGETADTLA AMRECKRKGH PTLAICNVVG SSIAREADGG IYLHAGPEVG VASTKAFTSQ VTVLTLLALF MGRIRHLSYP AGQRMIANLR KMPDKIRQTL ECHNRVKEIA RKYYTAENFL YLGRLHNFPV ALEGALKLKE ISYIHAEGYP AAEMKHGPIA LVDEQTPSVF VVPRCQIYPK VISNMEEVRA RRGPIIAIAC EGDDKVAELA DDVIYVPDVD EYLQPMVTSV PLQLLAYEIA LLRGCNVDRP RNLAKSVTVE
|
| |