Gene Plim_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1342 
Symbol 
ID9138036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1711188 
End bp1713050 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content56% 
IMG OID 
Productglucosamine/fructose-6-phosphate aminotransferase, isomerizing 
Protein accessionYP_003629375 
Protein GI296121597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.372378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGAA TCGTCGGCTA CATCGGCGCC AAGCCAGCGT CAAACTACCT GCTGGAAGGT 
CTGTTTCGTC TTGAGTACCG AGGGTATGAC AGCGCAGGAA TCGCAGTTCA ATCCGGCGAT
ACGATTGCTG TTCGCAAAAA GACGGGGCGA GTCGGTCAAC TTGCTGAACT CTTAAAAGCG
AGCCCGGTGA CTGGCACTCA TGGCATTGGC CACACACGCT GGGCGACACA TGGTCAGCCT
TCAGATAACA ACTCTCACCC GCATACCGGC GGAAATGGTG AAGTCGTCCT CGTTCACAAC
GGTGTGATCG AAAACTACGC GACCCTTCGC AGCCAGCTCC AGGAACTCGG CTACGTCTTC
CACTCACAGA CCGATACTGA AGTTGTTGCT CATCTGGTGG CGCACCAACT GGAAGAAGAA
CTCAAGCTCG GTGCAGATCC CGACTCAAAC GCAACCTATC TGCGAGCGGT TGAACTGACC
CTGAAGCAAC TCAAAGGGAC TTACGGCCTG GGTGTTCTCT TTCGAGATAA ACCCGGTCTG
CTCATTGCCG CCCGCCTGGG AAGCCCATTA GTCGTGGGTG TCGGCAAAGA CGAACATTAC
CTGGCCAGCG ATGCCAGCCC CCTGGTGGGA TACACCGACA AGGTGGTCTA CCTCAATGAC
CACGAAATCG CCATGATCAC TGCAAATTCT CTGGAAATTC TGCATCGCGA TACCGGCTCT
CAAACTCCTC ACATTCGTGT GCTCGAACAA ACCGCATCGG ATACCGAGCT CGGGCAGTTT
GAACATTACA TGCTCAAGGA AATCTTTGAG CAGCCGACAT CCATTGAAAA CGCCTTCCGT
GGACGACTCG ACGATGATGA AGCCACGGCA CGATTTGGTG GCCTGAATCT CGACCCGCAG
GAACTCCGCC GCATTGACCG AATCGTGCTC ACAGCCTGTG GCACGAGCTG GCATGCAGGT
CTCGTGGGTG AATACATCAT CGAAGAGTTT GCCCGCATAC CTGTCGAAGT CGAATATGCC
AGCGAACTGC GTTATCGCAA TCCCCCCATG TCCGAGCGAA CAATGGTCTT CGCCATCACT
CAAAGTGGGG AAACTGCCGA TACTCTGGCG GCCATGCGTG AATGCAAACG CAAAGGACAC
CCGACTCTCG CCATCTGCAA CGTTGTCGGG TCGTCAATCG CCCGCGAAGC CGACGGTGGA
ATTTATCTGC ATGCCGGCCC GGAAGTGGGT GTTGCATCGA CCAAGGCCTT CACATCCCAG
GTGACAGTCC TCACTTTGCT CGCACTCTTC ATGGGACGCA TTCGCCACCT TTCTTATCCG
GCGGGCCAGC GCATGATTGC CAACCTGCGA AAAATGCCCG ACAAGATTCG CCAGACGCTC
GAATGCCATA ACCGCGTCAA AGAGATCGCT CGAAAGTACT ACACTGCTGA AAACTTCCTT
TACCTGGGAC GTCTGCACAA CTTCCCCGTC GCGCTGGAAG GGGCTCTCAA GCTGAAGGAA
ATCAGTTACA TCCATGCCGA GGGCTATCCT GCCGCCGAGA TGAAACATGG GCCTATCGCG
CTGGTTGACG AACAGACGCC CAGTGTCTTC GTCGTTCCCC GTTGTCAGAT TTACCCCAAA
GTCATCAGCA ACATGGAAGA AGTCCGTGCC CGTCGTGGCC CGATTATCGC CATCGCCTGT
GAAGGTGACG ACAAAGTCGC TGAACTGGCA GACGACGTGA TCTATGTGCC CGATGTCGAT
GAATACCTCC AGCCGATGGT GACATCAGTC CCACTGCAGC TTTTGGCCTA CGAAATCGCC
CTGCTCCGCG GCTGCAACGT TGATCGCCCC CGCAATCTCG CCAAGAGCGT CACGGTGGAA
TAG
 
Protein sequence
MCGIVGYIGA KPASNYLLEG LFRLEYRGYD SAGIAVQSGD TIAVRKKTGR VGQLAELLKA 
SPVTGTHGIG HTRWATHGQP SDNNSHPHTG GNGEVVLVHN GVIENYATLR SQLQELGYVF
HSQTDTEVVA HLVAHQLEEE LKLGADPDSN ATYLRAVELT LKQLKGTYGL GVLFRDKPGL
LIAARLGSPL VVGVGKDEHY LASDASPLVG YTDKVVYLND HEIAMITANS LEILHRDTGS
QTPHIRVLEQ TASDTELGQF EHYMLKEIFE QPTSIENAFR GRLDDDEATA RFGGLNLDPQ
ELRRIDRIVL TACGTSWHAG LVGEYIIEEF ARIPVEVEYA SELRYRNPPM SERTMVFAIT
QSGETADTLA AMRECKRKGH PTLAICNVVG SSIAREADGG IYLHAGPEVG VASTKAFTSQ
VTVLTLLALF MGRIRHLSYP AGQRMIANLR KMPDKIRQTL ECHNRVKEIA RKYYTAENFL
YLGRLHNFPV ALEGALKLKE ISYIHAEGYP AAEMKHGPIA LVDEQTPSVF VVPRCQIYPK
VISNMEEVRA RRGPIIAIAC EGDDKVAELA DDVIYVPDVD EYLQPMVTSV PLQLLAYEIA
LLRGCNVDRP RNLAKSVTVE