Gene Plim_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1335 
Symbol 
ID9138029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1702763 
End bp1703515 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629368 
Protein GI296121590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGC TCCCGCGAGT TTATTGTGCC GGTCCTCTGT TCAACAGTAG CGAACGCGAG 
GAAATGACCT CGATCGCCAA TCGACTGAAC GCAGCTGGCT ATCCGGTCTA CCTGCCTCAT 
CGCGATGGCA TGGAATTTCG CCTGGTGCTG GATGTTTTGA TCGCTCGGGG ATACGAAAAA 
GCTGTCGCTG GTCAGTTCCT CCACAGCGCA ATCTTTGCAC TCGATGTCTA TCAACTCGTC 
TTTGCCTGCG ATGCGATCGT GTGGAATCTC AATGGTCGCG TCCCGGATGA AGGTGCAGTT 
TCCGAAGCGG CGATGGCTTG GATCCTGGGC AAACCGATGA TTGCCTTCTC GGATGATGCC 
CGCTCGCTGA TTGAAGGTCG CATCAATCCA CTCCTGTTTG GTCTGGTCGA TTTCCAGAAG 
GTGACTCTTA TCGAAGAGAT TGTCCCCGCA CTTCAAGCGG CTCTGCAAAA CTATCGAGCT 
GCGGGCTGGG TTCCTGCTGC GGAAAAACCT TTGCACCATC TGCCACCACG AGTGAGCCGG 
GCTGTCTCGG ATGGAGCCGC ATTGTGGAGC CTACTTGAAA ACAAGCCCAT CGAAGTCTCT 
CAGGCACAGC ACCATGTCCC CGATGAACAG CCCCAGTTTG TGGTGGGTGC TCAGCCTGTC 
TCGGCTGTTG ATGAGATTGA TAACGAACGC ATCGCCGACT GCGTCATCAA ACTCTTTGCT 
CCGGAACGGC TGTTACCAAT GACTACATCT TGA
 
Protein sequence
MNVLPRVYCA GPLFNSSERE EMTSIANRLN AAGYPVYLPH RDGMEFRLVL DVLIARGYEK 
AVAGQFLHSA IFALDVYQLV FACDAIVWNL NGRVPDEGAV SEAAMAWILG KPMIAFSDDA 
RSLIEGRINP LLFGLVDFQK VTLIEEIVPA LQAALQNYRA AGWVPAAEKP LHHLPPRVSR 
AVSDGAALWS LLENKPIEVS QAQHHVPDEQ PQFVVGAQPV SAVDEIDNER IADCVIKLFA 
PERLLPMTTS