Gene Plim_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1334 
Symbol 
ID9138028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1701748 
End bp1702773 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_003629367 
Protein GI296121589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGC ACTCATACAC CACCCGACCT CTTATTGCCA TCACGATGGG TGACCCGGCT 
GGAGTTGGCC CGGAACTTTG TGTCCGATTA CTGGCTCAGC CCTCAGTTCT TGAAGATAGT
TTGCCGATCA TCTGGGGTGA TGCTGAGGTG CTGGAGGCGG CCGCAGCCAG TACGGGGCAG
AAGCTGGCAA CTCCCGTGAT CTCATTATCA GAATTTACCA AGGGCATGTC TGTCACCGGG
CCGACCGTGA TTGATTGCGG GGCCATTGAG CTGAGCCAAT TCACGCCCGG AACTGTGAAT
GCTGCCACGG GTGATGCCAG TTTTCAGTAC ATTCAGCGAG CGATTGACGC TGCCCTTGCT
GGACGGGTGG CGGCAATTAC AACGGCTCCC ATCAGCAAAG AGGCACTTCA TCTGGCGGGA
CATCAGTTTC CCGGCCACAC CGAGATTTTC GCCAGCAGAA CTCAATCGAA TCGCTGGTGC
ATGATGCAGT ATTCGGAAGA AGTCGTGTGC ACTTTCGTGA CAGTCCACTG TGGGTATGCT
GAAGTGCCGC AATTGCTGAG CACTCAGCGA ATTCTGGAAG TTATTGAACT CACTCACGAA
GCGTTACTGA AAATTCGTGA TCGAGTGCCA AAAATCCTTG TTTGCGGGCT GAACCCGCAT
GCGGGTGAAC ATGGATTATT TGGACAGAGG GAAGAAGAAC GCATTATTGC ACCGGCTGTC
GACATGGCCA GAAAGCAGGG GTTTTCGGTC GAAGGGCCAC TCCCACCCGA TACCGCATTT
GTTCCAGCAC GCCGACGCAC TTCTGACGCA GTGGTCTGTA TGTATCACGA TCAGGGACAT
ATCCCCGTCA AGGCACTGGC CTTTGATTCC GCAGTGAATA CCACTCTGGG CTTGCCGATT
GTTCGCACCA GTGTTGATCA CGGTACGGCT CTGGACATCG CCTGGAAAGG TCTGGCGAAT
CCTGGCAGCC TCTATGCAGC CATCCGATTA GCAAACAAAC TGGCGACAAA ATCGCTCAAG
ATGTAG
 
Protein sequence
MDQHSYTTRP LIAITMGDPA GVGPELCVRL LAQPSVLEDS LPIIWGDAEV LEAAAASTGQ 
KLATPVISLS EFTKGMSVTG PTVIDCGAIE LSQFTPGTVN AATGDASFQY IQRAIDAALA
GRVAAITTAP ISKEALHLAG HQFPGHTEIF ASRTQSNRWC MMQYSEEVVC TFVTVHCGYA
EVPQLLSTQR ILEVIELTHE ALLKIRDRVP KILVCGLNPH AGEHGLFGQR EEERIIAPAV
DMARKQGFSV EGPLPPDTAF VPARRRTSDA VVCMYHDQGH IPVKALAFDS AVNTTLGLPI
VRTSVDHGTA LDIAWKGLAN PGSLYAAIRL ANKLATKSLK M