Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1334 |
Symbol | |
ID | 9138028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1701748 |
End bp | 1702773 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_003629367 |
Protein GI | 296121589 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCAGC ACTCATACAC CACCCGACCT CTTATTGCCA TCACGATGGG TGACCCGGCT GGAGTTGGCC CGGAACTTTG TGTCCGATTA CTGGCTCAGC CCTCAGTTCT TGAAGATAGT TTGCCGATCA TCTGGGGTGA TGCTGAGGTG CTGGAGGCGG CCGCAGCCAG TACGGGGCAG AAGCTGGCAA CTCCCGTGAT CTCATTATCA GAATTTACCA AGGGCATGTC TGTCACCGGG CCGACCGTGA TTGATTGCGG GGCCATTGAG CTGAGCCAAT TCACGCCCGG AACTGTGAAT GCTGCCACGG GTGATGCCAG TTTTCAGTAC ATTCAGCGAG CGATTGACGC TGCCCTTGCT GGACGGGTGG CGGCAATTAC AACGGCTCCC ATCAGCAAAG AGGCACTTCA TCTGGCGGGA CATCAGTTTC CCGGCCACAC CGAGATTTTC GCCAGCAGAA CTCAATCGAA TCGCTGGTGC ATGATGCAGT ATTCGGAAGA AGTCGTGTGC ACTTTCGTGA CAGTCCACTG TGGGTATGCT GAAGTGCCGC AATTGCTGAG CACTCAGCGA ATTCTGGAAG TTATTGAACT CACTCACGAA GCGTTACTGA AAATTCGTGA TCGAGTGCCA AAAATCCTTG TTTGCGGGCT GAACCCGCAT GCGGGTGAAC ATGGATTATT TGGACAGAGG GAAGAAGAAC GCATTATTGC ACCGGCTGTC GACATGGCCA GAAAGCAGGG GTTTTCGGTC GAAGGGCCAC TCCCACCCGA TACCGCATTT GTTCCAGCAC GCCGACGCAC TTCTGACGCA GTGGTCTGTA TGTATCACGA TCAGGGACAT ATCCCCGTCA AGGCACTGGC CTTTGATTCC GCAGTGAATA CCACTCTGGG CTTGCCGATT GTTCGCACCA GTGTTGATCA CGGTACGGCT CTGGACATCG CCTGGAAAGG TCTGGCGAAT CCTGGCAGCC TCTATGCAGC CATCCGATTA GCAAACAAAC TGGCGACAAA ATCGCTCAAG ATGTAG
|
Protein sequence | MDQHSYTTRP LIAITMGDPA GVGPELCVRL LAQPSVLEDS LPIIWGDAEV LEAAAASTGQ KLATPVISLS EFTKGMSVTG PTVIDCGAIE LSQFTPGTVN AATGDASFQY IQRAIDAALA GRVAAITTAP ISKEALHLAG HQFPGHTEIF ASRTQSNRWC MMQYSEEVVC TFVTVHCGYA EVPQLLSTQR ILEVIELTHE ALLKIRDRVP KILVCGLNPH AGEHGLFGQR EEERIIAPAV DMARKQGFSV EGPLPPDTAF VPARRRTSDA VVCMYHDQGH IPVKALAFDS AVNTTLGLPI VRTSVDHGTA LDIAWKGLAN PGSLYAAIRL ANKLATKSLK M
|
| |