Gene Plim_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1331 
Symbol 
ID9138025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1699366 
End bp1699911 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_003629364 
Protein GI296121586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACG TTGCTGGCCA TTTATTGATC TTCACTCTCT GCGGCGTTGT GCTCTTTGTC 
ATCCCGCTGG TCATCGGAAG ATGGATTCGA CCTGACCGAC CTTCTGCTGC CAAAGACGAT 
ATCTACGAAT GTGGTGAACC AACCATCGGA TCGAGCTTTA TTCAGTTTGA TCTCAGATTT 
TATGTCGTTG CACTCCTCTT TATCGTGTTC GATGTGGAAC TGGTTTTCTT CTTCCCCTGG 
GCACAGGTGT TCGGCTCAGC CATTCATCTG GCGGATACTT CAATCTCTGC CGACGCTGCC 
AATCATCTCA CTTCGACACT CTTTCCAGAG ATACTTTCTC CCTCAGCCTC TCAGCAAAAT 
TCTGCAACCT CAACAACCAG CCTGCATCCC AGGGCAGCAC TGGCATTAGG CTGGATGTCA 
TTTGTTGATG TCATCATCTT CTTTGCAGTG CTCCTCGTCG GGTTTGCCTA CCTCTGGAAA 
CGGGGGGACC TGGATTGGGT GCGGGCTGAC GAATTGAAAT CCATTGCCAA TCCATCCCAC 
AGATAA
 
Protein sequence
MTDVAGHLLI FTLCGVVLFV IPLVIGRWIR PDRPSAAKDD IYECGEPTIG SSFIQFDLRF 
YVVALLFIVF DVELVFFFPW AQVFGSAIHL ADTSISADAA NHLTSTLFPE ILSPSASQQN 
SATSTTSLHP RAALALGWMS FVDVIIFFAV LLVGFAYLWK RGDLDWVRAD ELKSIANPSH 
R