Gene Plim_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1330 
Symbol 
ID9138024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1698796 
End bp1699335 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_003629363 
Protein GI296121585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCC CGACTTTTGA ATTCGCTCTG CTAGAGCAAC AACTCCCCGG TGGTTCCGTC 
CGCCTGGTTG AAGCCGCCAC CGGCGACTCG TGGATCGAAC TGAAGAGCCA TGCCCTTCGC 
CAGGCCTGCC AGATACTGCG AGATCACCAG GATTGCCAGT TCAATGTTCT TTCGGATCTG 
ACAGCCGTTG ACTGGTTCAG CCCGGCAGGG AAAAAACCGG TCATTGCCGA CCCACGTTTC 
GAAGTCGTCT ATCACCTGCT TTCACTCTCT CGTCGGCAGA CACTGACTTT GAAAGTGATT 
TTGCCTCGAC CAGGTGGAGA TGAACTGTCC AAGGACGCTG AACTCCCCGA GATCCCGTCG 
ATTGCCGACC TTTGGCTGGC GGCCAATTGG CACGAGCGCG AAGCCTTCGA TATGTTTGGA 
ATTCGTTTTA AGGGTCATCC CGATTTACGG CGGATTCTTT GTCCAGAAGA CTGGGAAGGG 
TATCCACTTC GCAAAGATTA TGAATTCCCG CTGGAATATC ATGGAATTCG CGGACGATGA
 
Protein sequence
MSSPTFEFAL LEQQLPGGSV RLVEAATGDS WIELKSHALR QACQILRDHQ DCQFNVLSDL 
TAVDWFSPAG KKPVIADPRF EVVYHLLSLS RRQTLTLKVI LPRPGGDELS KDAELPEIPS 
IADLWLAANW HEREAFDMFG IRFKGHPDLR RILCPEDWEG YPLRKDYEFP LEYHGIRGR