Gene Plim_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1316 
Symbol 
ID9138010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1682198 
End bp1683550 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPhosphoglucosamine mutase 
Protein accessionYP_003629349 
Protein GI296121571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAC GGATTCTCAG TATTTCGGGC CTGCGTGGAG TCGTAGGTGA TGGGCTTGAT 
CCCGAGTATG TTGTTCGCTT TGCTGCGGCT TTGGGAACAT GGCTCAAAGG TGGGCATGTG
GTGCTTTCCC GAGATGGTCG AACCACAGGC GAAATGCTGC GGCATGCGGC CATTGCCGGG
TTGACGGCTG CCGGTTGCCG AGTCACGGAT CTGGGAATTG CGACTACTCC CACTTGTGGA
GTCGCTGTTC AGCAACTGGG GGCCGCTGGT GGCTTACAGA TCACCGCCAG TCATAATCCG
ATTGAATGGA ATGGATTGAA GCCCTTTTCG GCGCGTGGTT CCGTACTCAA TGCCACTCAA
GGAAAGGAAC TTCTGGAGAT TCTTGAAAAG CAGGGCCCGA CTTATCGGTC GTGGGAAACA
GTGGGGTCTG TCGTCGAAGA TCCTTCAGCC GCCATGTTTC ACTTGAGCAG GGTGAATGCA
CTGATTGATC TGCCCGTGGT TCAAGCCCGG AAGTTCAAAG TGGTGCTCGA TTGCACTCAC
GGTTCGGGCT CGATCCTCTC ACCCGAGTGG CTGAGAACGC TCGGCTGCGA AGTCGTCGTA
TTAGGAGGAG TGGCTGATGG CCGGTTTGAA CATCCGGCTG AACCATTGCG GGAAAATCTC
ACATCACTCA TGGATGCTGT TCGAGCACAT CATGCGGATG TCGGGTTTGC TCAGGATCCT
GATGCCGATC GACTGGCGAT TGTCGATGAA ACAGGCCATT ACATCGGTGA AGAGTTGACT
CTGGCCCTAT GTGTCGATCA TGTCCTATCC CGAGCCAAAG GGGCGGTGGT GGTCAATGGT
TCGACCAGCA GGACGACAGC CGATATTGCG GCCCGGTATG GCTGCGAGTT CATTCGATCG
GCTGTGGGCG AAGCGAATGT GGTTGCTCGC ATGATCGAAG TCCACGCGCT GATTGGAGGC
GAAGGGAACG GCGGTGTAAT CGAGCCGAAG GTAGGCTATG TTCGCGATAG CCTGGTCAGT
ATGGCTTACG TGCTTCATGC GCTGGCGCTG AAAAAGTGCC GGCTTTCCGA GTGGGTCAGC
ACCCTTCCCA GTTACACGAT TGTGAAAGAC AAGATCACCT GCGGTCGCGA ATCTGTGCAA
CCAGCATGTG ACCGTCTTAA GGAAATCTTT TCCGACGCAT CGATTGTTGA GGGCGACGGC
TTGAGGCTCG ATTGGCCCGA TCGCTGGGTG CAGGTGCGTG CCAGCAATAC CGAGCCCATC
ATCCGGATGA TTGCTGAAGC TCCCCAGGCT GCCGATGCTC AACAGTTAGT CGATCGGGCC
AAGTCTGTCG TGGCACAAAT CGTCAATGGT TAA
 
Protein sequence
MGERILSISG LRGVVGDGLD PEYVVRFAAA LGTWLKGGHV VLSRDGRTTG EMLRHAAIAG 
LTAAGCRVTD LGIATTPTCG VAVQQLGAAG GLQITASHNP IEWNGLKPFS ARGSVLNATQ
GKELLEILEK QGPTYRSWET VGSVVEDPSA AMFHLSRVNA LIDLPVVQAR KFKVVLDCTH
GSGSILSPEW LRTLGCEVVV LGGVADGRFE HPAEPLRENL TSLMDAVRAH HADVGFAQDP
DADRLAIVDE TGHYIGEELT LALCVDHVLS RAKGAVVVNG STSRTTADIA ARYGCEFIRS
AVGEANVVAR MIEVHALIGG EGNGGVIEPK VGYVRDSLVS MAYVLHALAL KKCRLSEWVS
TLPSYTIVKD KITCGRESVQ PACDRLKEIF SDASIVEGDG LRLDWPDRWV QVRASNTEPI
IRMIAEAPQA ADAQQLVDRA KSVVAQIVNG