Gene Plim_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1300 
Symbol 
ID9137994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1660784 
End bp1661608 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID 
Productglutamine cyclotransferase 
Protein accessionYP_003629333 
Protein GI296121555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCA AATTCTCCAG GGAATGGTCG CTCTTTGTTG TCCTGTGCTG CATGTGGTCT 
CAGGTCGCTT GCGATCACTC GACGGCTCAC TCACGAGATC GAGTCTTGCC TGTCGAAAAG
GCCGAGGTTG TGGCCGCTTT TCCACACGAT CCAGAAGCCT TCAGCCAGGG GTTGGTGGTC
GAGGGCGGTA CTCTCTACGA AAGTACGGGC CTGTTTGGAA GTTCTTCGTT GCGGATTGTG
GATCTGGAAA CCGGGAAAGT TCAAAAGATT GTTCGCTTGA ACGATCAGTA TTTCGGTGAG
GGGCTCACCA AACGGGGTGA CCAACTGATT CAGATCACGT GGAAGAATCG CGAAGCCTTT
GTGTTTGACG CAGCAACTTT GGAATACAAA TCGACGATCC GCTATGCGGG TGAAGGGTGG
GGTCTCACTC GCTGGGGCGA ACATCTGGTC ATGAGTGATG GTTCATCTGT ACTCAAGGTT
TTAGAACCAG AGACCTTTCG AGTATTAAAA AAAATCTCGG TCCGCGCGGA TGGTCGAGCG
GTCTCCGATC TCAATGAACT CGAGACTGTG GGAAACGAAA TCTGGGCCAA TGTCTGGCAT
CGCGATCTCA TCCTGAGAAT TGATCCTCGA ACAGGAGAGG GGATTGGCTG GATCGATCTG
AGCCATCTGT TTCCTTCCAA TCGTCGTCCT CATCAGGAGG CAGTTCTAAA TGGAATCGCT
TATGATCCAG TGAAAGGCCG GTTGTTTGTC ACCGGGAAAA ACTGGCCTCA ATTGTTTGAG
ATTCGAGTCG ACTCACTCCC GGAACCAGCC GCCAAAAAGC CCTGA
 
Protein sequence
MPIKFSREWS LFVVLCCMWS QVACDHSTAH SRDRVLPVEK AEVVAAFPHD PEAFSQGLVV 
EGGTLYESTG LFGSSSLRIV DLETGKVQKI VRLNDQYFGE GLTKRGDQLI QITWKNREAF
VFDAATLEYK STIRYAGEGW GLTRWGEHLV MSDGSSVLKV LEPETFRVLK KISVRADGRA
VSDLNELETV GNEIWANVWH RDLILRIDPR TGEGIGWIDL SHLFPSNRRP HQEAVLNGIA
YDPVKGRLFV TGKNWPQLFE IRVDSLPEPA AKKP