Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1296 |
Symbol | |
ID | 9137990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1656503 |
End bp | 1657780 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glutamyl-tRNA reductase |
Protein accession | YP_003629329 |
Protein GI | 296121551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.353465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTCC ATGTCGTCTC CTGCAATCAT CAATCCTCAG GATTGGCAAT TCGTGAAAGA CTCGCTTTTT CCAGTGCCGA AGATATCCAG CGGGCTTATC AGGAGTTCCA CGAGCGCTTC CCGACATCAG AAGTCGTGTT CCTTTCGACC TGTAATCGTG TGGAAGTCTA TGCAGCGAAC ACTGAAGAAG ATCCTGCCGT CGTCAGGCAG AATCTGGCTT CGTTTCTCTC CGAGTTTCAT CATGTTCCTC TGGAAGAGTT TTCCGAGGAA CTGACGGAAC ATACTGGCCC AGAGGCGGTG CAGCATTTGT TTCAGGTCGT GTCGAGCCTG GACAGCATGG TGCTTGGTGA GCCGCAAATC GTGGCTCAGG TGAAAGATGC TTATCGTAAA GCAGACGAAA ACGGCAGTTG CGGTGCTTTG ACGCATGCTC TGTTTCAAGG TGCGATCCGC ACATCCAATC GGGTGCGGAC AGAGACCAGA CTTTCCAATG GTCGGGTATC GATTGCCAGT GTCGCTGTTG GAGAATTCGG GAAGAGCATT TTCGATACGT TTGCCGACAA AATCGTCGTG GTGATCGGTG CCGGCGAGAT GGCGGAGGAG ACACTCCGAT ACCTGGCGGA TGAAGGTGTG CAGCAGGTCA TTGTCGTCAA TCGCAGCCGA GATCGTGCCG AGCGTTTGGC AGAGAAGTAC CGAGGACAAG TTGCCGACTG GCAGCAACTG GACGAATGGC TGGGGAAAGC CGACGTGATT GTGAGTACCA CTGGTGCGGA TGAACCTGTG GTGACGATGG CTCGTTTTGA ATTGGCTCGC AGAAAGCAGA ACCGCTACAA GCCTGTGTTT ATCATTGACC TGGGTGCTCC CAGAGATTTT GACGTGAAGA TCGCTTCGCT CGATGATGTT TATCTGTATG ACATTGACAG CCTGCAGAAA ACCTGTGACC GCAACCGCAA GCTGCGTCAG GCCGAAGTTG AAAAAGCGAA CCGCATTATC GAGGAAGAAA CTCAGCGGTT CATGAGTGAG TTTTACAGCC GGGCGGGCGG TGCGATCGTT AAACGCCTGC GCGATGACTG GCATTCGATC AGCCAGCAGG AATTGCAGAA GCTGTTTTCA AAACTTTCGC ATCTGCCTGC CGAAGACCGA GATGCCATTG AACGTACGGT CGCGCGAATT GTGAATAAGC TGTTGCACCC GCCGCTGGAA GCCTTACGTG ACGAATCGAA GGGTGGCTCG CCCAATGGCT TGCTCGATGC TTTATCGAGA CTCTTCCGCT TGCGATGA
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Protein sequence | MNLHVVSCNH QSSGLAIRER LAFSSAEDIQ RAYQEFHERF PTSEVVFLST CNRVEVYAAN TEEDPAVVRQ NLASFLSEFH HVPLEEFSEE LTEHTGPEAV QHLFQVVSSL DSMVLGEPQI VAQVKDAYRK ADENGSCGAL THALFQGAIR TSNRVRTETR LSNGRVSIAS VAVGEFGKSI FDTFADKIVV VIGAGEMAEE TLRYLADEGV QQVIVVNRSR DRAERLAEKY RGQVADWQQL DEWLGKADVI VSTTGADEPV VTMARFELAR RKQNRYKPVF IIDLGAPRDF DVKIASLDDV YLYDIDSLQK TCDRNRKLRQ AEVEKANRII EEETQRFMSE FYSRAGGAIV KRLRDDWHSI SQQELQKLFS KLSHLPAEDR DAIERTVARI VNKLLHPPLE ALRDESKGGS PNGLLDALSR LFRLR
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