Gene Plim_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1296 
Symbol 
ID9137990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1656503 
End bp1657780 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content53% 
IMG OID 
Productglutamyl-tRNA reductase 
Protein accessionYP_003629329 
Protein GI296121551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.353465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCC ATGTCGTCTC CTGCAATCAT CAATCCTCAG GATTGGCAAT TCGTGAAAGA 
CTCGCTTTTT CCAGTGCCGA AGATATCCAG CGGGCTTATC AGGAGTTCCA CGAGCGCTTC
CCGACATCAG AAGTCGTGTT CCTTTCGACC TGTAATCGTG TGGAAGTCTA TGCAGCGAAC
ACTGAAGAAG ATCCTGCCGT CGTCAGGCAG AATCTGGCTT CGTTTCTCTC CGAGTTTCAT
CATGTTCCTC TGGAAGAGTT TTCCGAGGAA CTGACGGAAC ATACTGGCCC AGAGGCGGTG
CAGCATTTGT TTCAGGTCGT GTCGAGCCTG GACAGCATGG TGCTTGGTGA GCCGCAAATC
GTGGCTCAGG TGAAAGATGC TTATCGTAAA GCAGACGAAA ACGGCAGTTG CGGTGCTTTG
ACGCATGCTC TGTTTCAAGG TGCGATCCGC ACATCCAATC GGGTGCGGAC AGAGACCAGA
CTTTCCAATG GTCGGGTATC GATTGCCAGT GTCGCTGTTG GAGAATTCGG GAAGAGCATT
TTCGATACGT TTGCCGACAA AATCGTCGTG GTGATCGGTG CCGGCGAGAT GGCGGAGGAG
ACACTCCGAT ACCTGGCGGA TGAAGGTGTG CAGCAGGTCA TTGTCGTCAA TCGCAGCCGA
GATCGTGCCG AGCGTTTGGC AGAGAAGTAC CGAGGACAAG TTGCCGACTG GCAGCAACTG
GACGAATGGC TGGGGAAAGC CGACGTGATT GTGAGTACCA CTGGTGCGGA TGAACCTGTG
GTGACGATGG CTCGTTTTGA ATTGGCTCGC AGAAAGCAGA ACCGCTACAA GCCTGTGTTT
ATCATTGACC TGGGTGCTCC CAGAGATTTT GACGTGAAGA TCGCTTCGCT CGATGATGTT
TATCTGTATG ACATTGACAG CCTGCAGAAA ACCTGTGACC GCAACCGCAA GCTGCGTCAG
GCCGAAGTTG AAAAAGCGAA CCGCATTATC GAGGAAGAAA CTCAGCGGTT CATGAGTGAG
TTTTACAGCC GGGCGGGCGG TGCGATCGTT AAACGCCTGC GCGATGACTG GCATTCGATC
AGCCAGCAGG AATTGCAGAA GCTGTTTTCA AAACTTTCGC ATCTGCCTGC CGAAGACCGA
GATGCCATTG AACGTACGGT CGCGCGAATT GTGAATAAGC TGTTGCACCC GCCGCTGGAA
GCCTTACGTG ACGAATCGAA GGGTGGCTCG CCCAATGGCT TGCTCGATGC TTTATCGAGA
CTCTTCCGCT TGCGATGA
 
Protein sequence
MNLHVVSCNH QSSGLAIRER LAFSSAEDIQ RAYQEFHERF PTSEVVFLST CNRVEVYAAN 
TEEDPAVVRQ NLASFLSEFH HVPLEEFSEE LTEHTGPEAV QHLFQVVSSL DSMVLGEPQI
VAQVKDAYRK ADENGSCGAL THALFQGAIR TSNRVRTETR LSNGRVSIAS VAVGEFGKSI
FDTFADKIVV VIGAGEMAEE TLRYLADEGV QQVIVVNRSR DRAERLAEKY RGQVADWQQL
DEWLGKADVI VSTTGADEPV VTMARFELAR RKQNRYKPVF IIDLGAPRDF DVKIASLDDV
YLYDIDSLQK TCDRNRKLRQ AEVEKANRII EEETQRFMSE FYSRAGGAIV KRLRDDWHSI
SQQELQKLFS KLSHLPAEDR DAIERTVARI VNKLLHPPLE ALRDESKGGS PNGLLDALSR
LFRLR