| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1293 |
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| Symbol | |
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| ID | 9137987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1651777 |
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| End bp | 1654188 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003629326 |
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| Protein GI | 296121548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.269788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGA CAACTGTCTT TCATGCCAGT CTGTATGGCA CGATCTGTCT GGCGGGCTTT
ATTCTGGGCC GAGCTGAGGG CAACTTTATC CCTTATCTCA CGATTCTTGT GGCCATGGTC
GGCTACATGC TGACTGAGCA TTACAAAAAA TGGATGGTCA CTGTTCCTGT CGCCAATGCT
TTGGGGCTTG TGGCCTTTCT CGTCGCAGCT ATTGAATTCA CTGTGGGTGA CCGTGAAGGA
AAGCTTCTGG CTGGTGCGCA TCTGGTGGTT TATCTGAACT GGATTGTGCT GCTGCAAAAG
AAAACCAATC GACAATACTG GGCTATGGCG GCACTGAGTT TATTGCAGGT GGCTGTCGCC
TCCGTTCTGA CGAACGACAG TTGGTATGGT GGCATGCTCG TCCTTTATTC CGTAGTGGCG
ATGTGGTCGC TGGCGATCTT TTCGCTGCAT CAGGCCAATC AGCAATTTGA ATCCGGACGA
CGCGAACCGG TGTCTCGATC TCCGATGGCA GGTTCTTCGA TCGCCATGAC GACCGCTTCC
GTGATTATGC CCAGTGAAAC CTGGAGCACT ATTCGTCACG ATGGTTCGGC AAGGTGGGTC
ACGCCGCGTT TCATCCTGGG CGTCATGACC ATTGCCGGCA TGTCGCTCAT GCTCAGTGGC
GTGTTCTTTA CGCTTGTGCC GCGAGTGTGG ATTGGCCCGC GTTTATCATT AGGTGATGAA
GCCGATGGTC CGGTGGGCAG TCTGGGCCGC AATACCATGA CAGGCTTCAC GTCTCAGGTG
AAACTGGGCT CACTGGGCGA AATTCTGGAA AATTCAACAC CGGTGCTTCA GGTCAGGTTG
TTCGATTCCG AAACAGATCG GGAAATCGAT GTCAATCAGT ATTGTGAGCG ACTTGGTTAT
GCCGAGCCTC TCTTTCGAGG CATTGTGCTG AGCCGTTACG AATCGAGCCA ATGGCTGGCC
GATGTGGTCT TTTCTTCACA AGATCCATTA CCACGCATTC TCGCGGAGCC GGCAGTGCGC
CAGGAGTATG TTCTGGAGCC AGTCGGGACA GATCTGCTCT TTGTCATTGG CGATGTGAGG
GCTTGCGATC TTGATGGTTC CGAACGCCGT CGGGTTGTGA AGCATACCAC AACCTCTGTG
CTGACACGCG ATAGCGTGGG ACGTTCGGGA AGTGCGGAAC GGATTGGCTA TACTGCGTAC
TCGGCACCAA TGCCGGCTGT TGTGCAGCCC TTTGCCATCA TGCCGGTTTC CTCCAGGCTC
TGGCAGGAAT ATCTCTCGCG CAATTATCTG GAAGACCTGC TGATCCTCAA TGATGATGTC
GCGGCGATTC GGCCGATTGT CGAGCGCATT CTTGAAGAAA AAACCCGACA GGTGGGCAGC
AAACTGACTC CTGTACAACA GGCAGTCGCG CTCGAATCGT GGCTGCGCGA CAGTGGGAAT
TTCAAGTATA CGCTCAAACA GGCGCGTGTG GATCTGACGG TTGATCCCGT GATCGATTTT
CTCATCAACC GCAAGGAAGG GCATTGTGAA TACTTCAATA CAGCCCTCGC ACTCATGCTG
CGGGCTGCCG GAATTCCCTC ACGTTTAGTG AGTGGATTCA AAGGAGGAGA TACGAATCCT
TTGAATGGCC GATTTGAAGT CCAGCAGCGG CATGCTCATG TCTGGGTGGA GGCATTTCTA
ACTGAGCCTA ATGGCAAGTT CTTCTGGGGC ACCTTTGATG CCACGCCTGT CGCAGAGCGG
AATACAGAAC TGGAAACCAT CGGTGGCAAA ATGACTTTCT GGCAGGCCAT GTCGAGTGAG
ATTTCCATGT TCTGGTCTCG CTATGTGGTG AATGTCACTC TGAATGATCA GGAGCAGGGG
GTCTACGGCC CGCTGCGCGA TTGGGTGGCA TCGCTGGGTG GTCAGTTAAA GGATCGCACC
GGTGGCATTC AGAGCCTCCT GTACGGCCTC TTCTCGATTC TGGCGTCACC CAAAGAGTGG
CTCACTGTCA GTGGTATGTT GAGGTTGCTG ATTATTCTCG TCTTGTTCAC GGGCCTGTTG
TATGTCCTCA GATACGGCAT CAAACTTTCA CTGAAGGGGT TCTCGAAGTA TTCCCAGAAG
CGAAAAGTTG AACGCAAGGT TGTCGAGTTT TACGAGCGAT TCCAGAAAGT CATCGCTCAG
GCTGGCTTTA AGCGGGATGA AGCTCAGACC CAGAGAGAAT TTGCACTGCA GGTGACTCAC
AAACTTTCGC ACCGACTCCA CGACGAATCT GTGTTGAAAC TCCCTGAAGA ACTGACCGAG
TTGTTTTATA AAGTCCGCTT CGGGGATGAT ATCGTTGATG CCGCGACGGC TCAGTCATTA
GATGACCGGC TGGATCGTCT TGAGAGCCTG CTCGATACCA ACCGGCAGCG TCAACATGCT
TCTAAGGTTT AG
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| Protein sequence | MPLTTVFHAS LYGTICLAGF ILGRAEGNFI PYLTILVAMV GYMLTEHYKK WMVTVPVANA
LGLVAFLVAA IEFTVGDREG KLLAGAHLVV YLNWIVLLQK KTNRQYWAMA ALSLLQVAVA
SVLTNDSWYG GMLVLYSVVA MWSLAIFSLH QANQQFESGR REPVSRSPMA GSSIAMTTAS
VIMPSETWST IRHDGSARWV TPRFILGVMT IAGMSLMLSG VFFTLVPRVW IGPRLSLGDE
ADGPVGSLGR NTMTGFTSQV KLGSLGEILE NSTPVLQVRL FDSETDREID VNQYCERLGY
AEPLFRGIVL SRYESSQWLA DVVFSSQDPL PRILAEPAVR QEYVLEPVGT DLLFVIGDVR
ACDLDGSERR RVVKHTTTSV LTRDSVGRSG SAERIGYTAY SAPMPAVVQP FAIMPVSSRL
WQEYLSRNYL EDLLILNDDV AAIRPIVERI LEEKTRQVGS KLTPVQQAVA LESWLRDSGN
FKYTLKQARV DLTVDPVIDF LINRKEGHCE YFNTALALML RAAGIPSRLV SGFKGGDTNP
LNGRFEVQQR HAHVWVEAFL TEPNGKFFWG TFDATPVAER NTELETIGGK MTFWQAMSSE
ISMFWSRYVV NVTLNDQEQG VYGPLRDWVA SLGGQLKDRT GGIQSLLYGL FSILASPKEW
LTVSGMLRLL IILVLFTGLL YVLRYGIKLS LKGFSKYSQK RKVERKVVEF YERFQKVIAQ
AGFKRDEAQT QREFALQVTH KLSHRLHDES VLKLPEELTE LFYKVRFGDD IVDAATAQSL
DDRLDRLESL LDTNRQRQHA SKV
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