| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1287 |
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| Symbol | |
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| ID | 9137981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1644407 |
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| End bp | 1645720 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | xylose isomerase |
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| Protein accession | YP_003629320 |
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| Protein GI | 296121542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTACT TTCCTGAAAT CTCGAAGATC GTCTACGAAG GCCCAAAGTC TAAAAATCCG
CTGGCTTTCA AGCATTACAA CGCGGACGAA CAGATCGAAG GGCAATCCAT GAAGGATCTG
CTCCGGTACA GCGTGGCCTA CTGGCACACC TTCCGCGGCA CCGGAAGTGA TCCATTTGGT
GGAGCCACTT TGCAAAAGCC CTGGGATGAC GGCACAGAAT CCGTGGCCAA CGCCATCAAG
CGAGTCGATG TGGCCTTTGA GTTCGTCGAA AAGCTGGGAG CCCCGTTCTA CTGCTTCCAT
GACCGCGATG TGGCTCCCGA AGGGGCCACA CTGGCTGAGT CGAACAAGAA TCTCGACGCC
GTGGTCGCTC GACTGAAGGA GAAACAGCTG GAAACCGGAA TCAAGCTTCT CTGGGGCACT
GCCAATCTCT TTTCGCACCC ACGGTACATG CACGGAGCTG CGACCAGCCC CAATGCCGAT
GTCTTTGCAT ATGCCTGTGC ACAGGTCAAA AAAGCACTGG AAGTCACCCA CGAACTCGGC
GGTGAAAACT ATGTGTTCTG GGGTGGTCGC GAAGGCTATC AGAACCTCTA CAACACCGAT
ATGAAACGAG AACTCGACCA TCTGGCCAAG TTCATGCATC TCGCGGTCGA ACATGCCAAG
GCCATTGGCT TCAAAGGTCA GTTCCTGTTT GAACCTAAGC CGAAAGAACC GACCAAGCAT
CAGTACGATT TCGATGTGGC AGCCTGTATG AACTTCTGCC GGGCTTATGG CCTGACAGAT
TACGTCAAAA TGAACATCGA AACGAACCAC GCCACGCTGG CGGGCCACAC GATGATGCAT
GAACTGGCGT ATGCCTCAAT GCAGAATGCA CTGGGAAGCA TTGATGCCAA CACTGGCGAC
CTGCTCCTGG GCTGGGATAC CGATCAATTC CCGACAGACA TTTACCTGAC GACACAGTGC
ATGCTGGTGA TCCTCGAACA ACAGGGACTG GCACCGGGTG GGATCAACTT CGATGCCAAG
GTTCGTCGTG AAAGCTTCGA GCCGGTGGAT CTCTTCTATG CTCACATTGG CGGAATGGAT
GCTTTTGCCC GTGGTGCAAA GATTGCGGCC GCCATTCGTA AAGATGGCGT GCTCAAGGAT
TTCGTAAAGA ATCGTTACGC CACCTGGGAT GCAGGGATTG GCAACAGCGT TGAATCTGGC
AAGATCACCT TTGCCGATCT GGAAAAGTAC GTATTGGAAG GTAAAGCGGT TGCCAAGAAT
CAGTCGGGGC GACAGGAACT GCTGGAAAAC ATCATCAATG ATTACATTCA GTAA
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| Protein sequence | MSYFPEISKI VYEGPKSKNP LAFKHYNADE QIEGQSMKDL LRYSVAYWHT FRGTGSDPFG
GATLQKPWDD GTESVANAIK RVDVAFEFVE KLGAPFYCFH DRDVAPEGAT LAESNKNLDA
VVARLKEKQL ETGIKLLWGT ANLFSHPRYM HGAATSPNAD VFAYACAQVK KALEVTHELG
GENYVFWGGR EGYQNLYNTD MKRELDHLAK FMHLAVEHAK AIGFKGQFLF EPKPKEPTKH
QYDFDVAACM NFCRAYGLTD YVKMNIETNH ATLAGHTMMH ELAYASMQNA LGSIDANTGD
LLLGWDTDQF PTDIYLTTQC MLVILEQQGL APGGINFDAK VRRESFEPVD LFYAHIGGMD
AFARGAKIAA AIRKDGVLKD FVKNRYATWD AGIGNSVESG KITFADLEKY VLEGKAVAKN
QSGRQELLEN IINDYIQ
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