| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1281 |
|---|
| Symbol | |
|---|
| ID | 9137975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1638585 |
|---|
| End bp | 1639703 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003629314 |
|---|
| Protein GI | 296121536 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.282786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCACAAA GGATTGCTCT GATCATTCCG ACGCTGGATC AGTCAGGGGC TGAAAAGCAG
TTCACGCTGT TAGCGACTCA TTTGTCGAAA GCGGATTTTA CCTGCAGAGT CCTGGCACTC
ACCAGAGGCG GCCCTTATGA GAAAATTCTG CAAGAGCACG ACATCGAAGT GCGTATTCTA
AACAAGCGAT GGAAGTTCGA TCCCTGGGCT TACTCACGGC TTCGACGCGA ATTGATCGAG
TTTGATCCAG ATATTGTCCA TACCTGGCTT TTTGCTGCCA ATGCTTATGG TCGTCTGGCT
GCCAGAGCCG TTCCTCGCGC CAAAGTGGTC GTTTCTGAGC GTTGCGTCGA CAGTTGGAAA
GCTGGTTGGC AGACATTCCT TGATCGGCGT CTCATCGCCG GGACCGATCA ACTCATCGGT
AACTCGAAAA GCGTGGTGGA GTTTTATCGG AAGTTGGGCA TTCCAGAGAG CAAGCTGGGT
TGTATTCCCA ATGGCATTGA GTTGCCTGTA ATCGAACCAG TTTCGCTGGC TTCCAAAGAG
ACTTGGAGAA GCGAGCAGGG GATTCCCAAA GAAAGTTTTG TGGTGGGTTA TGTCGGCAGA
CTGGCCCCGC AAAAAGCCAT TCAAGACCTG ATCTGGGCTA TTGAAACCTT AAGGCAGATT
CGTCCTCAGT GTCATCTTTA CATTGCGGGA GATGGCCCGG AACGAGGTCG ACTGGAGAGA
TTGGTACATG CCGTGCATGC CAATGCCCAT GTCCATTTTG CGGGACATGT GAACAAAACA
GATGAGATCT ATCGACATAT CGATGCGTTT TGTTTGCCGA GTCGCTTTGA AGGGATGTCC
AATAGCCTGT TAGAAGCGAT GAGTTGGGGA GTTCCCTGCC TGGCAAGTGC AATTCCAGCG
AACGCAGAGT TGATCGAGAA TGCCAGAAGT GGTCTTTTGT TCAATGCCGG GGATGCTGTG
GGATTGATGC AAGGGCTGCG GCGGTTCATT GATGAGCCCG AACTGCGGCA TCATCTGGGC
CAGCAGGCGC GGCAGCGAGT TTCCAGTGAA TTTACGATTT CTCAAATGGT GGATCGCTGG
GTATCTGTTT ACAGAAGTTT AAATGCAGTC AATGGTTAA
|
|---|
| Protein sequence | MPQRIALIIP TLDQSGAEKQ FTLLATHLSK ADFTCRVLAL TRGGPYEKIL QEHDIEVRIL
NKRWKFDPWA YSRLRRELIE FDPDIVHTWL FAANAYGRLA ARAVPRAKVV VSERCVDSWK
AGWQTFLDRR LIAGTDQLIG NSKSVVEFYR KLGIPESKLG CIPNGIELPV IEPVSLASKE
TWRSEQGIPK ESFVVGYVGR LAPQKAIQDL IWAIETLRQI RPQCHLYIAG DGPERGRLER
LVHAVHANAH VHFAGHVNKT DEIYRHIDAF CLPSRFEGMS NSLLEAMSWG VPCLASAIPA
NAELIENARS GLLFNAGDAV GLMQGLRRFI DEPELRHHLG QQARQRVSSE FTISQMVDRW
VSVYRSLNAV NG
|
|---|
| |