Gene Plim_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1268 
Symbol 
ID9137962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1625159 
End bp1625824 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629301 
Protein GI296121523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTT CTGGCCGCTC ACCGAAGGCC TCAAAGCCAG CCCTTGCTTC ATTGGAAAGC 
AAGCTCGAAC CCGAAAACTC GATCCATTGC GAGAACCGCA ATGCGTGGCG AGCGTGGCTG 
CAAACACATC ACCTCGCATC GACAGGCGTC TGGCTCATCA CCTACAAAAA AGGCCGGCAT 
CACGAATGGC TGGGCTATGA TGCCATCGTC GAGGAAGCGC TTTGCTTCGG GTGGATCGAC 
AGCCTTCCAC GAAAACTCGA CGAAACCCGC ACAATGCTTT ATGTCTCTCC CCGAAAGCCC 
AAAAGCGGTT GGTCGAAAGT CAACAAAGAA CGTATCCACC GTCTCGAACA ACAGGGACTT 
CTAGCTCCAG CAGGCATGGC CAGAATTCAA GCGGCCAAAG AGGATGGCAG TTGGGATAAG 
CTGACGACAG TCGATGAACT CGAAGTGCCG GATGATCTTG CCGAGGAATT CGCCCGCTGG 
CCTGGTTCGT CGGCGAACTT TGCAGCTTTC CCTCCTTCGG CCAGACGCGG CATTCTCGAA 
TGGATTCTCA ATGCCAAAAG GCCACAGACT CGTCATGCGA GGATTGTCGA AACAGCGAGT 
CAAGCAGCGC GTAATGAGCG TGCCAATCAG TGGAAACCCA AATCATCGCC TGGGGCCAAT 
TCCTGA
 
Protein sequence
MAFSGRSPKA SKPALASLES KLEPENSIHC ENRNAWRAWL QTHHLASTGV WLITYKKGRH 
HEWLGYDAIV EEALCFGWID SLPRKLDETR TMLYVSPRKP KSGWSKVNKE RIHRLEQQGL 
LAPAGMARIQ AAKEDGSWDK LTTVDELEVP DDLAEEFARW PGSSANFAAF PPSARRGILE 
WILNAKRPQT RHARIVETAS QAARNERANQ WKPKSSPGAN S