Gene Plim_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1249 
Symbol 
ID9137943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1602417 
End bp1603088 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629282 
Protein GI296121504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0784897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA GACTTCTCAT CGTGCTCGTC GTTTTACTGT GTCTAACGGC TTTCTTTGCA 
GGCATTGTGG CCGTTCAGCC CGAAGAATTT CATATCACTC GATCGGCAGT CATGAAGGCG 
ACACCCGACA AGGTGGGCGA AAGAATCGAT CACTTCAAAG CCTGGGCAGA CTGGTCACCG 
TGGGCCAAAC TCGACCCCAA TTCGAAAGAG GAATTTGAAG GACCGGCACA AGGTCCCGGT 
GCCATCATGA AATGGTCGGG TAATGACGAG GTCGGCGAAG GGAAGATGAC GATCCTCGAA 
ACACGCCCCG GCGAGTACAT TAAAATTCAG CTCGACTTCA TCCGCCCCAT GGTCGCCTCT 
AATCTCGTCG AATTTCAGTT AGAACCTCAA GGGGAAGAGA CCAAAGTCAC CTGGTCAATG 
TCGGGCAAGA ACAACTTCGT CGGCAAAGCT TTTCACCTGA TTGTCGATTG CGACAAAATG 
ATCGGTGGTG ACTTTGAAAA AGGGCTCAAT AGCATGAAAG CTCTTGTCGA AGCCCCACCA 
GCACTCACAG AAGAACCTCA GTCAAAAGCA AAACCAGACG CTGATGCCGT CCTGGAAAAA 
CCGGCTGAAG TGAACAAACC CAGCGAACAA TCAGCCCCCG TTGATAGCGT GACCACTCCA 
CCTGCTCCAT GA
 
Protein sequence
MKQRLLIVLV VLLCLTAFFA GIVAVQPEEF HITRSAVMKA TPDKVGERID HFKAWADWSP 
WAKLDPNSKE EFEGPAQGPG AIMKWSGNDE VGEGKMTILE TRPGEYIKIQ LDFIRPMVAS 
NLVEFQLEPQ GEETKVTWSM SGKNNFVGKA FHLIVDCDKM IGGDFEKGLN SMKALVEAPP 
ALTEEPQSKA KPDADAVLEK PAEVNKPSEQ SAPVDSVTTP PAP