Gene Plim_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1246 
Symbol 
ID9137940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp1599048 
End bp1599686 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003629279 
Protein GI296121501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.188109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCTG AGAATTTCCA GAAGAGCTTT ATCACTCAAA AAGAAGAGCT TCGCCAAAGT 
GTGCGGTCGG CCCGTTTGGC AATGACAGAT CGGTCTGAGC GGAGTCATCG GATCCTCGAT 
CAACTGGAAA GTTCAGAACC ATGGAAGAAG TGCCGGGTAC CTCTGGTTTA CCTCTCCAGT 
GGCAGCGAAG TGATGACCTG GCCGCTTGTC GAGAAAGTGC TGAAGGAGCT TGAACAGACC 
GCTGGATGCA CTCGGAAGTT GATCGTCCCG TGGTGTGACG GCGATGAATT GAGGCTGTTC 
TGGCTGCAGA GTCTCGATGA GTTATCGGCT GGCTCTTTTG GGATTCCAGA GCCACGCGCT 
GAAATGAGAA CTCAGCCGGA TCGCTGTGCG AATCTTGCGG AGATCGATCT GGTCGTCTTG 
CCGGGATTGG CTTTCGATGA GCAGGGGCGA AGACTGGGGC AGGGACGGGG CTATTTTGAT 
CGATTGCTGA TGGAGCTGAA TCCCCATGCG ATTAAAGTGG GCCTGGCTTT TGAGGTTCAA 
ATGGTCGAGG AAGTTCCTGT CGAAGAACAT GATCTGCCAG TCGATCTCGT GATCACTGAA 
AGCCGAATGA TCTGGAGTGA TGTCACTCCG GGAAGTTGA
 
Protein sequence
MSSENFQKSF ITQKEELRQS VRSARLAMTD RSERSHRILD QLESSEPWKK CRVPLVYLSS 
GSEVMTWPLV EKVLKELEQT AGCTRKLIVP WCDGDELRLF WLQSLDELSA GSFGIPEPRA 
EMRTQPDRCA NLAEIDLVVL PGLAFDEQGR RLGQGRGYFD RLLMELNPHA IKVGLAFEVQ 
MVEEVPVEEH DLPVDLVITE SRMIWSDVTP GS