Gene Plim_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1240 
Symbol 
ID9137934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1591026 
End bp1591871 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629273 
Protein GI296121495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTCGG GGATGGCCTC TTCCTGGAAT CAGCTCCTTC ATAGGAGAAA CCAGCTTCTG 
GTGAGTGTCC GGAATGCCGA AGAGGCCAGG CTGGTGGTCA ATTCCGGGGT CGCTGTGCTG
GACGTTAAAG ACCCTGCGCG GGGAGCCCTG GGCAGGGCCG ACGAATCTGT CTGGAGAGAA
ATTCTGGCTG TTGCCGGAAA ACATCGGGTT GCGCCTGGGG TCTCAGAAAA GTCCTCAGGC
AGGCCGACTC GTGTCCATTC TGGTTTGGTG ACGTCACTCG CACTCGGGGA ACTTTTAGAA
GTTGAACCGT GTGCGATTCC GGAAGGCGTT GATGTCTTAA AAGTGGGGTT AGCTCAGTGT
GGACGGCAAC AGTGTGCAGG CCAACGGGAA GATCAAGAAG GCTGGACTCG AAAATGGCTC
CAGTTCCGAG AGCAAACAGA AGCTCTGTCA AAACGCAGTT TCCGCTGGAT GGCAGTCGCC
TATTTTGACT CTGCGGCACG AGCCCCCGAT CTGGAAGAAG TCAAGACTTT TGCCATCCAG
CAACAGTTGG CCGGCGTGCT GATTGACAGT TATGAGAAAA CGGGTCAAAC GATGACCGAC
GTTTACAGTT GGGAACAATT GAGTGCTTGT CGAGATGAAC TGGTCGCTGC TGGGATGCTG
CTCGCCATTG CCGGCCAGAT TCGAGAAGAA ATGCTACCCG TTCTCAAGAA ACTTGAGCCG
CATTTGCTGG CCGTTCGATC AGCAGTTTGT CAATTGCGGG ATCGAAATCG GAGTGTGAGT
CCCGAGGCTC TGGAAAAGTT TAGTGCGGAG TTGTCGCTGC CGCTGGAAGC TATGACTCGG
CAATAG
 
Protein sequence
MCSGMASSWN QLLHRRNQLL VSVRNAEEAR LVVNSGVAVL DVKDPARGAL GRADESVWRE 
ILAVAGKHRV APGVSEKSSG RPTRVHSGLV TSLALGELLE VEPCAIPEGV DVLKVGLAQC
GRQQCAGQRE DQEGWTRKWL QFREQTEALS KRSFRWMAVA YFDSAARAPD LEEVKTFAIQ
QQLAGVLIDS YEKTGQTMTD VYSWEQLSAC RDELVAAGML LAIAGQIREE MLPVLKKLEP
HLLAVRSAVC QLRDRNRSVS PEALEKFSAE LSLPLEAMTR Q