Gene Plim_1236 details

Gene Information

• Locus tag: Plim_1236
• ID: 9137930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1587125
• End bp: 1587820
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 57%
• Product: peptidase M22 glycoprotease
• Protein accession: YP_003629269
• Protein GI: 296121491

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGATC AACTGCCTCT GATTCTGGGG ATCGAAACCT CAGGCCGTGA AGGTTCGCTG 
GCACTTGTTC GAGGGGACGA GATTGTCGGT CACCGTCAGC TCGAAACGAC GGGCCGCCGG 
CATGCGCAAA CACTCGTGGC TGAGCTGGCA CAGATGTGCC GTGAGGCGCA AGTGCAACCT 
CACGAGATCA CGGCTGTTAG CGTGAGTATT GGCCCCGGAA GTTTTACGGG ACTGAGAGTG 
GGTTGTACTG TCGCCAAGAC CATTTGCTAT ACGACGGGAG CGAAACTGTT GGCGGTCGAT 
AGTCTGCTGG CGAGCGCGAC CGCCTGGAGT GGCGAACATC GTCAAGTCTG GGCGATTGAA 
GATGCCCAGC GTGGTGAATT GTTCGTGGGG CATTACCAGC GAAGTTCAAT TGGTTTTTCA 
CGGAGTGATG CCATTCAGAT CGTTAAATCG CGGGAATGGC TCGCGGGCCT GACGACCACA 
GATGTGCTGA TCGGCCCGGG ATTGTCTCGA ATTGTGGAGT TATCGACCGC AGCTCAGCGA 
ATCGAAGCCA GCGTGGCAGC TCCTCCCGCG ACCACAATTG CCCGCCTGGC ACAGAAACTC 
TATGACCAGG CACAGTTTTC AGATCCCTGG ACGCTCGAGC CTTTCTACGC AAGGCTCAGT 
GCTGCAGAAG AAAAGGCTGC GAAGGCCAGA TCTTGA 

 

Protein sequence

MSDQLPLILG IETSGREGSL ALVRGDEIVG HRQLETTGRR HAQTLVAELA QMCREAQVQP 
HEITAVSVSI GPGSFTGLRV GCTVAKTICY TTGAKLLAVD SLLASATAWS GEHRQVWAIE 
DAQRGELFVG HYQRSSIGFS RSDAIQIVKS REWLAGLTTT DVLIGPGLSR IVELSTAAQR 
IEASVAAPPA TTIARLAQKL YDQAQFSDPW TLEPFYARLS AAEEKAAKAR S