Gene Plim_1235 details

Gene Information

• Locus tag: Plim_1235
• ID: 9137929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1585086
• End bp: 1587128
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 52%
• Product: UvrD/REP helicase
• Protein accession: YP_003629268
• Protein GI: 296121490

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGATA TTTCGCATTT GAATCGCCCA CAGCAGGAGG CCGTGCGGAC ACATCGCGGG 
CCACTTCTGG TTCTGGCCGG CGCTGGAACT GGCAAGACAC GAGTCATTAC CTATCGCATG 
GCCGATCTCA TCGCTGCTGG CGTTGATCCT GAACGAATTC TTTCGGTGAC GTTCACCAAT 
AAAGCGGCCC GGGAAATGCT GGATCGAACC TCATTGCTCT TAGGCCGCAC CATGAAAAAG 
CGGCCCACAA TCTCGACGTT TCACAGTTGG TGTGTGGGCA TTCTGAGACA GGAAATTGAT 
TCACTGGGAT ATCCCAAACA GTTCGTGATT TATGATCGCG GAGATCAGGA GTCAGCGGCA 
CGAAAAGCTC TGCAAGTCCT TAAGATGACC GATACGGCTT TGAAACCTGG AGATCTTCTC 
GCCCAGATCA GTCGCTGGAA GATGCAGGGA GTCATGCCCG ATCTCGCACA GGAGATTGCC 
GATTCGGATC ATGAACAACT CGCCGGCATG GCTTACCGCA GGTACCAACT GGCGCTCAAG 
GCGGCTGGCG GAGTCGATTT TGATGACCTG CTATTCCTGA CATTTCAATT GTTCAAACAT 
CATCCGGAAG CACTTGAGCG ACAGCAGAAT CGATTCGACT TTGTGCAGAT TGATGAATAC 
CAGGACACGA ATGAACTGCA GTTTCGATTG ATCGAATCCA TCGTGAGGCG GCACCAGAAT 
CTCTGTGTGG TGGGTGATGA TGACCAGTCT ATCTACGGCT GGCGCGGTGC CGAGGTGAAG 
CATATTCTAG GTTTTAAGCA GTCATTTCCT GCTGCAAAAG TGGTGCGACT GGAAGACAAT 
TATCGCTGCA CAGAGTCGAT CATTCAGTTG GCCAATCAAC TTGTGGCCCA TAATCGTGGT 
CGTCATGAGA AGCGATTGAT TGCTCATCGG GGGGGAACAT CGGTGGTGTT CCGGGAATAT 
CCCGATGAGC AGGCAGAAGC CGAAGGCGTG GTGCGGGATA TTGCTTATCT GATTCATCAG 
CTCAATGTTC GCCCCTGCGA AATCGCGATC CTCTTTCGCA CCAATGAGCA GCCTCGAATT 
TTTGAGCATG AACTTCGCCG CAAGCAGATT CATTATCGAA TTGTCGGTGG ACAATCCTTC 
TTTGATCGCA AGGAAATCAA AGACCTGCAG GCTTATTTGA AAGTGCTTGT GAATCCGCGG 
GACGATCTTT CGCTACTGCG GATTATCAAC GTACCTCCGC GCGGGATTGG TGACGCAACC 
TGCGAGCGAT TACTGGCCAG AGCTGTCAAA GAGAAACGTC GATTCTGGGA TGTGATTCCG 
GATGCGGCTG CCGCTGGCGA GATTACATCC AAGGCACTCA ATAACCTGCG ACAGTTTGAA 
AAGCAGATGT CGGGTTTGAG AGAAGCCTTT AAACAACCCG GGGTCAAGTT AAGCGAAACA 
TTCCTGCGGA TGGTCGAGAC CACTGGTTAC GCCCGTGAAA TTGAGCGAAC CTATAAATCA 
GCCGAGCAGC AGGAAATGAG AAATCTGATT CTGGGTGAAT TCGCAAATGC CGTCTCGCAA 
TATGAGGCCC AGTCGAGGTC CCCTTCACTG GAGGGATATC TCGATGAGAT CTCTTTGGGA 
GGATCTGATT TTGCTGCCCC CGAACGACCC GATGAAAATG CCATTACTCT GATGACTTTG 
CATAGTGCCA AAGGTCTGGA GTTTGAGCGG GTTTATCTTG TGGGGTTGGA AGAGGGGATA 
TTGCCACATA AACGCAGTGT CGATGAAGAG TTTGAAAACC CATCCTCTGT CGAAGAAGAA 
CGGCGGCTCT GTTACGTGGG AATTACTCGG GCGAAAGATT TTCTGACAAT TACCCGTTCG 
CAGAGCCGGG TGAAATGGGG CAAGAAACGC GAGACCAAGC CGTCGCGATT TTTGAAAGAA 
ATGCGAACTG CGATCGAAAC CACTGCCGCT CCGGAGGGAG CGGGTATTGA TACAGCGGCC 
CGATCCCGGA CAACCGGCGG CGGACGAACC GGCCATCCCG CCCCACATGG AGAAATGTTG 
TGA 

 

Protein sequence

MLDISHLNRP QQEAVRTHRG PLLVLAGAGT GKTRVITYRM ADLIAAGVDP ERILSVTFTN 
KAAREMLDRT SLLLGRTMKK RPTISTFHSW CVGILRQEID SLGYPKQFVI YDRGDQESAA 
RKALQVLKMT DTALKPGDLL AQISRWKMQG VMPDLAQEIA DSDHEQLAGM AYRRYQLALK 
AAGGVDFDDL LFLTFQLFKH HPEALERQQN RFDFVQIDEY QDTNELQFRL IESIVRRHQN 
LCVVGDDDQS IYGWRGAEVK HILGFKQSFP AAKVVRLEDN YRCTESIIQL ANQLVAHNRG 
RHEKRLIAHR GGTSVVFREY PDEQAEAEGV VRDIAYLIHQ LNVRPCEIAI LFRTNEQPRI 
FEHELRRKQI HYRIVGGQSF FDRKEIKDLQ AYLKVLVNPR DDLSLLRIIN VPPRGIGDAT 
CERLLARAVK EKRRFWDVIP DAAAAGEITS KALNNLRQFE KQMSGLREAF KQPGVKLSET 
FLRMVETTGY AREIERTYKS AEQQEMRNLI LGEFANAVSQ YEAQSRSPSL EGYLDEISLG 
GSDFAAPERP DENAITLMTL HSAKGLEFER VYLVGLEEGI LPHKRSVDEE FENPSSVEEE 
RRLCYVGITR AKDFLTITRS QSRVKWGKKR ETKPSRFLKE MRTAIETTAA PEGAGIDTAA 
RSRTTGGGRT GHPAPHGEML